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*/*: sync with upstream

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Taken from: HardenedBSD
This commit is contained in:
Franco Fichtner 2019-01-12 09:05:35 +01:00
parent e9d92b253f
commit 914d2ff30f
598 changed files with 5533 additions and 3329 deletions
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6
accessibility/kmag/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225569
SHA256 (KDE/applications/18.12.0/kmag-18.12.0.tar.xz) = a75e1130b3b49e16077a109cfb509bd8a98efc9733b8bb04934344cc095b2c56
SIZE (KDE/applications/18.12.0/kmag-18.12.0.tar.xz) = 628812
TIMESTAMP = 1546985117
SHA256 (KDE/applications/18.12.1/kmag-18.12.1.tar.xz) = fc6213c843918800abc457a23a41ad2dd73f76cc093615daeebb0bf5ed72e9c5
SIZE (KDE/applications/18.12.1/kmag-18.12.1.tar.xz) = 629164

6
accessibility/kmousetool/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225569
SHA256 (KDE/applications/18.12.0/kmousetool-18.12.0.tar.xz) = 60593618ba00d3eb21ae913fc676a2d023fe1208d400e8961056d2c34398dc02
SIZE (KDE/applications/18.12.0/kmousetool-18.12.0.tar.xz) = 112708
TIMESTAMP = 1546985117
SHA256 (KDE/applications/18.12.1/kmousetool-18.12.1.tar.xz) = 1dd91586383c0a42d1f65c4ee8a16ca18b4c01cfe572ffb1520e845267f7dc1f
SIZE (KDE/applications/18.12.1/kmousetool-18.12.1.tar.xz) = 112712

6
accessibility/kmouth/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225569
SHA256 (KDE/applications/18.12.0/kmouth-18.12.0.tar.xz) = 69dcb704cd5733d3b120530757a627a7af6529fc4d3631cfc6464ade55e7e145
SIZE (KDE/applications/18.12.0/kmouth-18.12.0.tar.xz) = 1766124
TIMESTAMP = 1546985117
SHA256 (KDE/applications/18.12.1/kmouth-18.12.1.tar.xz) = 85f3c76712037f4f97d798e043fe569f43b49f08db7de15d6be0549729d402bd
SIZE (KDE/applications/18.12.1/kmouth-18.12.1.tar.xz) = 1766284

1
archivers/ark/Makefile
View file

@ -2,7 +2,6 @@
PORTNAME= ark
DISTVERSION= ${KDE_APPLICATIONS_VERSION}
PORTREVISION= 1
CATEGORIES= archivers kde kde-applications
MAINTAINER= kde@FreeBSD.org

6
archivers/ark/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225568
SHA256 (KDE/applications/18.12.0/ark-18.12.0.tar.xz) = 2f50e6f5b0973e6e760499c680d9c54aeef0d93c9440db4805401399148ad59a
SIZE (KDE/applications/18.12.0/ark-18.12.0.tar.xz) = 2580244
TIMESTAMP = 1546985116
SHA256 (KDE/applications/18.12.1/ark-18.12.1.tar.xz) = 0665a10b860a914b64b5e41de6c159f5dac9fbf1dce10f5c097cc88611568add
SIZE (KDE/applications/18.12.1/ark-18.12.1.tar.xz) = 2580288

2
astro/josm/pkg-descr
View file

@ -3,4 +3,4 @@ experienced OSM mapper. It requires some configuration efforts. But if you
intend to become a great OSM mapper, it's worth the time you need to get
used to it.
WWW: http://wiki.openstreetmap.org/wiki/JOSM
WWW: https://josm.openstreetmap.de/

6
astro/libkgeomap/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225572
SHA256 (KDE/applications/18.12.0/libkgeomap-18.12.0.tar.xz) = 71c3e20f3c7b36967be8a1898274eec02b2214d2962a23ed8927b4718964b1de
SIZE (KDE/applications/18.12.0/libkgeomap-18.12.0.tar.xz) = 151164
TIMESTAMP = 1546985120
SHA256 (KDE/applications/18.12.1/libkgeomap-18.12.1.tar.xz) = bf4928d386415642e943f553fb285da225027cb69cf442facb3962a475384e46
SIZE (KDE/applications/18.12.1/libkgeomap-18.12.1.tar.xz) = 151076

1
astro/marble/Makefile
View file

@ -2,7 +2,6 @@
PORTNAME= marble
DISTVERSION= ${KDE_APPLICATIONS_VERSION}
PORTREVISION= 1
CATEGORIES= astro kde kde-applications
MAINTAINER= kde@FreeBSD.org

6
astro/marble/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225573
SHA256 (KDE/applications/18.12.0/marble-18.12.0.tar.xz) = db39df148d327a61fd6080d4b3e55c8734762e4042c98386229fe3fbbcd85f52
SIZE (KDE/applications/18.12.0/marble-18.12.0.tar.xz) = 52415644
TIMESTAMP = 1546985120
SHA256 (KDE/applications/18.12.1/marble-18.12.1.tar.xz) = 9e3f078279f07dabf83dbc52f0cecf479020bbaf886ca9a3631e275509905541
SIZE (KDE/applications/18.12.1/marble-18.12.1.tar.xz) = 52422648

2
astro/p5-Astro-SpaceTrack/Makefile
View file

@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= Astro-SpaceTrack
PORTVERSION= 0.123
PORTVERSION= 0.124
CATEGORIES= astro perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-

6
astro/p5-Astro-SpaceTrack/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1543584850
SHA256 (Astro-SpaceTrack-0.123.tar.gz) = 219e12e0845ac7a1ec804787d2909985352e430741f082c8f11d32536b0386c4
SIZE (Astro-SpaceTrack-0.123.tar.gz) = 173701
TIMESTAMP = 1547167148
SHA256 (Astro-SpaceTrack-0.124.tar.gz) = 1e11a185433e690a5eaba5405bbb7a022c6897d8129bc5913f16bc845fdd1021
SIZE (Astro-SpaceTrack-0.124.tar.gz) = 173607

8
audio/audacity/Makefile
View file

@ -83,11 +83,11 @@ DEBUG_CONFIGURE_WITH= debug
DOCS_BUILD_DEPENDS= docbook-to-man:textproc/docbook-to-man \
docbook2man:textproc/docbook-utils
DYNLOAD_BUILD_DEPENDS= ${LOCALBASE}/libdata/pkgconfig/libavcodec.pc:multimedia/ffmpeg
DYNLOAD_BUILD_DEPENDS= ${LOCALBASE}/include/lame/lame.h:audio/lame
DYNLOAD_BUILD_DEPENDS= ${LOCALBASE}/libdata/pkgconfig/libavcodec.pc:multimedia/ffmpeg \
${LOCALBASE}/include/lame/lame.h:audio/lame
DYNLOAD_CONFIGURE_ENABLE= dynamic-loading
DYNLOAD_CPPFLAGS= -I${LOCALBASE}/include # for audio/lame using
DYNLOAD_LDFLAGS= -L${LOCALBASE}/lib # for audio/lame using
DYNLOAD_CPPFLAGS= -I${LOCALBASE}/include # for audio/lame
DYNLOAD_LDFLAGS= -L${LOCALBASE}/lib # for audio/lame
FFMPEG_CONFIGURE_WITH= ffmpeg=system
FFMPEG_LIB_DEPENDS= libavcodec.so:multimedia/ffmpeg

6
audio/audiocd-kio/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225582
SHA256 (KDE/applications/18.12.0/audiocd-kio-18.12.0.tar.xz) = 35ded6eb564f06fa7234d6b88b57dff245b657bcb8571b43546616f63ed39310
SIZE (KDE/applications/18.12.0/audiocd-kio-18.12.0.tar.xz) = 249952
TIMESTAMP = 1546985128
SHA256 (KDE/applications/18.12.1/audiocd-kio-18.12.1.tar.xz) = d73c51ae99e82ca616c7cc21296ffa9341ff7f9cb6fa84ee75c96dc0451b604f
SIZE (KDE/applications/18.12.1/audiocd-kio-18.12.1.tar.xz) = 250504

2
audio/audiocd-kio/pkg-plist
View file

@ -4,10 +4,10 @@ include/audiocdplugins_export.h
lib/libaudiocdplugins.so
lib/libaudiocdplugins.so.5
lib/libaudiocdplugins.so.5.0.0
%%QT_PLUGINDIR%%/kcm_audiocd.so
%%QT_PLUGINDIR%%/libaudiocd_encoder_flac.so
%%QT_PLUGINDIR%%/libaudiocd_encoder_lame.so
%%QT_PLUGINDIR%%/libaudiocd_encoder_wav.so
%%QT_PLUGINDIR%%/libkcm_audiocd.so
%%QT_PLUGINDIR%%/libkio_audiocd.so
share/config.kcfg/audiocd_flac_encoder.kcfg
share/config.kcfg/audiocd_lame_encoder.kcfg

2
audio/avldrums-lv2/Makefile
View file

@ -2,7 +2,7 @@
PORTNAME= avldrums
DISTVERSIONPREFIX= v
DISTVERSION= 0.3.1
DISTVERSION= 0.3.2
CATEGORIES= audio
PKGNAMESUFFIX= -lv2

6
audio/avldrums-lv2/distinfo
View file

@ -1,5 +1,5 @@
TIMESTAMP = 1542950922
SHA256 (x42-avldrums.lv2-v0.3.1_GH0.tar.gz) = 5b6e94b81198b2c63d5135e2d3102e66ee26a2aca42508b14a60ec99634fbae7
SIZE (x42-avldrums.lv2-v0.3.1_GH0.tar.gz) = 35091562
TIMESTAMP = 1547094033
SHA256 (x42-avldrums.lv2-v0.3.2_GH0.tar.gz) = c08a42b2e8715ff8ee2ca6df52b301e0715da138caf783fec9bcca2e7be0bd09
SIZE (x42-avldrums.lv2-v0.3.2_GH0.tar.gz) = 35234075
SHA256 (x42-robtk-9b82274_GH0.tar.gz) = a1be15f2507295e98e35b5dec4c07f39df1a4b5fb651cd2f9e038472dc9aa7e7
SIZE (x42-robtk-9b82274_GH0.tar.gz) = 114473

6
audio/juk/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225582
SHA256 (KDE/applications/18.12.0/juk-18.12.0.tar.xz) = 5f89c2cf9a0bb1470064d54e0766f64a0cf4eace47812db637f6207931db5dcb
SIZE (KDE/applications/18.12.0/juk-18.12.0.tar.xz) = 1874936
TIMESTAMP = 1546985128
SHA256 (KDE/applications/18.12.1/juk-18.12.1.tar.xz) = 36e89ce921e959b2b158bc79a61decbf71bcf7c975973650f5ea8d1f98baf493
SIZE (KDE/applications/18.12.1/juk-18.12.1.tar.xz) = 1875404

6
audio/kmix/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544478538
SHA256 (KDE/applications/18.12.0/kmix-18.12.0.tar.xz) = 49311a4043acaba2ee58ce3b715334aef11a19338b1c84b2f15484c48569a126
SIZE (KDE/applications/18.12.0/kmix-18.12.0.tar.xz) = 1075664
TIMESTAMP = 1546985128
SHA256 (KDE/applications/18.12.1/kmix-18.12.1.tar.xz) = e3684124bbf7cf1e4997a1a6627e439b0291bb06646b76e07a09d35e629547e5
SIZE (KDE/applications/18.12.1/kmix-18.12.1.tar.xz) = 1075688

6
audio/kwave/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225582
SHA256 (KDE/applications/18.12.0/kwave-18.12.0.tar.xz) = 10661106435de26f2cd1e2b9fb83f966e7722ed99b87c36f3a0da6ae22880502
SIZE (KDE/applications/18.12.0/kwave-18.12.0.tar.xz) = 6212188
TIMESTAMP = 1546985129
SHA256 (KDE/applications/18.12.1/kwave-18.12.1.tar.xz) = a312c997d787d350348bdb507d098e017f53d7cf579ff4bc5462f9ff9dc31494
SIZE (KDE/applications/18.12.1/kwave-18.12.1.tar.xz) = 6212400

6
audio/libkcddb/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225581
SHA256 (KDE/applications/18.12.0/libkcddb-18.12.0.tar.xz) = ca71baa4d29e0e1c17d0b67d46adce0ef2d915152cff78b56239e5cdca5ab595
SIZE (KDE/applications/18.12.0/libkcddb-18.12.0.tar.xz) = 426692
TIMESTAMP = 1546985128
SHA256 (KDE/applications/18.12.1/libkcddb-18.12.1.tar.xz) = a5849aafc0f6f619c4a0a7d2dbd19c71de9b7f310c7a3b84d5303c11dc5c39cd
SIZE (KDE/applications/18.12.1/libkcddb-18.12.1.tar.xz) = 426576

6
audio/libkcompactdisc/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225582
SHA256 (KDE/applications/18.12.0/libkcompactdisc-18.12.0.tar.xz) = 6adef7596d24d9c586de3dea83c0d4f1f2687cbc1d3f702822d6a1bba0093ccb
SIZE (KDE/applications/18.12.0/libkcompactdisc-18.12.0.tar.xz) = 88580
TIMESTAMP = 1546985128
SHA256 (KDE/applications/18.12.1/libkcompactdisc-18.12.1.tar.xz) = 4ca9ff51d3d9ea106c65484af024263e99cb0f4f6d8de8a57b922e9c7482ee6c
SIZE (KDE/applications/18.12.1/libkcompactdisc-18.12.1.tar.xz) = 88544

28
audio/musescore/Makefile
View file

@ -2,11 +2,12 @@
# $FreeBSD$
PORTNAME= musescore
PORTVERSION= 2.1
PORTREVISION= 4
DISTVERSION= 3.0.0
PORTREVISION= 1
CATEGORIES= audio
MASTER_SITES= http://ftp.osuosl.org/pub/musescore/releases/MuseScore-${PORTVERSION}/
DISTNAME= MuseScore-${PORTVERSION}
MASTER_SITES= http://ftp.osuosl.org/pub/musescore/releases/MuseScore-${DISTVERSION}/
DISTNAME= MuseScore-${DISTVERSION}
NO_WRKSUBDIR= yes
MAINTAINER= adridg@FreeBSD.org
COMMENT= Free music composition & notation software
@ -14,7 +15,8 @@ COMMENT= Free music composition & notation software
LICENSE= GPLv2
LICENSE_FILE= ${WRKSRC}/LICENSE.GPL
BROKEN_aarch64= Fails to compile: error: constant expression evaluates to -1
# Because of webengine
ONLY_FOR_ARCHS= i386 amd64
LIB_DEPENDS= libmp3lame.so:audio/lame \
libsndfile.so:audio/libsndfile \
@ -25,18 +27,24 @@ LIB_DEPENDS= libmp3lame.so:audio/lame \
USES= cmake compiler:c++11-lib desktop-file-utils \
pkgconfig qt:5 shared-mime-info zip
USE_QT= core declarative gui widgets opengl concurrent designer help network \
scripttools svg sql printsupport testlib webkit \
scripttools svg sql printsupport testlib \
xml xmlpatterns \
buildtools_build linguisttools_build qmake_build uitools_build
ALL_TARGET= lrelease manpages all
INSTALLS_ICONS= yes
CMAKE_ARGS+= -DUSE_SYSTEM_FREETYPE="ON"
CMAKE_ARGS+= -DUSE_SYSTEM_FREETYPE="ON" \
-DBUILD_PORTMIDI=OFF \
-DBUILD_PCH=OFF
DATADIR= ${PREFIX}/share/mscore-${PORTVERSION}
DATADIR= ${PREFIX}/share/mscore-${PORTVERSION:R}
OPTIONS_DEFINE= ALSA JACK PORTAUDIO PULSEAUDIO OCR
OPTIONS_DEFINE= ALSA JACK PORTAUDIO PULSEAUDIO OCR WEBENGINE
OPTIONS_DEFAULT= PORTAUDIO
OPTIONS_DEFAULT_amd64= WEBENGINE
OPTIONS_DEFAULT_i386= WEBENGINE
OCR_DESC= Optical Character Recognition
WEBENGINE_DESC= Use WebEngine in the welcome panel
ALSA_LIB_DEPENDS= libasound.so:audio/alsa-lib
ALSA_CMAKE_BOOL= BUILD_ALSA
@ -47,6 +55,8 @@ PORTAUDIO_CMAKE_BOOL= BUILD_PORTAUDIO
PULSEAUDIO_LIB_DEPENDS= libpulse.so:audio/pulseaudio
PULSEAUDIO_CMAKE_BOOL= BUILD_PULSEAUDIO
OCR_CMAKE_BOOL= OCR
WEBENGINE_USE= qt=webengine
WEBENGINE_CMAKE_BOOL= BUILD_WEBENGINE
.include <bsd.port.pre.mk>

6
audio/musescore/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1502602140
SHA256 (MuseScore-2.1.zip) = 51b2fd09d8d0afff84ce6aee0e14854465462616b0ef92ad8dd2325257d3bc12
SIZE (MuseScore-2.1.zip) = 55072555
TIMESTAMP = 1547127510
SHA256 (MuseScore-3.0.0.zip) = 8a764a1f8911502cb9887c84cde4a8dda193a766337b8e477e89185cbf3722c6
SIZE (MuseScore-3.0.0.zip) = 116183004

18
audio/musescore/files/patch-CMakeLists.txt Normal file
View file

@ -0,0 +1,18 @@
The custom precompiled-headers handling causes dependency
loops in Ninja. I don't see much value in the PCH here, so
just zero them out. (Neither do I understand how ninja ends
up with the dependency loop; make handles this without complaint)
--- CMakeLists.txt.orig 2018-12-24 13:27:49 UTC
+++ CMakeLists.txt
@@ -727,8 +727,8 @@ precompiled_header(QT_INCLUDES all ${BUILD_PCH})
# MSVC does not require these targets, as all.h is not copied and the
# PCH generation is done per-project
if (NOT MSVC)
- ADD_CUSTOM_TARGET(mops1 DEPENDS ${PROJECT_BINARY_DIR}/all.h)
- ADD_CUSTOM_TARGET(mops2 DEPENDS ${PCH})
+ ADD_CUSTOM_TARGET(mops1 DEPENDS ) # ${PROJECT_BINARY_DIR}/all.h)
+ ADD_CUSTOM_TARGET(mops2 DEPENDS ) # ${PCH})
endif (NOT MSVC)
##

22
audio/musescore/files/patch-git_9c8a8f
View file

@ -1,22 +0,0 @@
From 9c8a8ffe0cbb00ee93a10fe245da01a4d32ca086 Mon Sep 17 00:00:00 2001
From: Orcan Ogetbil <orcan@localhost.localdomain>
Date: Thu, 31 May 2018 21:04:51 -0400
Subject: [PATCH] added missing #include <QButtonGroup> required by qt >= 5.11
---
all.h | 1 +
1 file changed, 1 insertion(+)
diff --git a/all.h b/all.h
index 72db72b0ec..2ee0e8e807 100644
--- all.h
+++ all.h
@@ -131,6 +131,7 @@
#include <QProgressBar>
#include <QProgressDialog>
#include <QRadioButton>
+#include <QButtonGroup>
#include <QSplashScreen>
#include <QFontComboBox>
#include <QApplication>

36
audio/musescore/files/patch-mscore_CMakeLists.txt
View file

@ -1,20 +1,22 @@
--- mscore/CMakeLists.txt.orig 2017-04-27 04:14:22 UTC
Editorialize. What are they thinking?
--- mscore/CMakeLists.txt.orig 2019-01-10 20:08:02 UTC
+++ mscore/CMakeLists.txt
@@ -493,7 +493,6 @@ else (MINGW)
${ALSA_LIB}
${QT_LIBRARIES}
z
- dl
pthread
@@ -661,7 +661,7 @@ else (MINGW)
if ( NOT MSVC )
## install qwebengine core
- if (NOT APPLE AND USE_WEBENGINE)
+ if (YOU_CANT_SERIOUSLY_SUGGEST_TO_COPY_WEBENGINE_EXECUTABLES_AROUND)
install(FILES
${QT_INSTALL_LIBEXECS}/QtWebEngineProcess
DESTINATION bin
@@ -674,7 +674,7 @@ else (MINGW)
${QT_INSTALL_TRANSLATIONS}/qtwebengine_locales
DESTINATION lib/qt5/translations
)
- endif(NOT APPLE AND USE_WEBENGINE)
+ endif(YOU_CANT_SERIOUSLY_SUGGEST_TO_COPY_WEBENGINE_EXECUTABLES_AROUND)
@@ -550,9 +549,6 @@ else (MINGW)
# gold does not use indirect shared libraries for symbol resolution, Linux only
if (NOT APPLE)
- if (USE_JACK)
- target_link_libraries(mscore dl)
- endif (USE_JACK)
target_link_libraries(mscore rt)
endif (NOT APPLE)
target_link_libraries(mscore
${ALSA_LIB}

22
audio/musescore/files/patch-mscore_editstringdata.cpp
View file

@ -1,22 +0,0 @@
--- mscore/editstringdata.cpp.orig 2018-12-11 15:55:46 UTC
+++ mscore/editstringdata.cpp
@@ -52,7 +52,8 @@ EditStringData::EditStringData(QWidget *parent, QList<
strg = (*_strings)[numOfStrings - i - 1];
_stringsLoc.append(strg);
QTableWidgetItem *newCheck = new QTableWidgetItem();
- newCheck->setFlags(Qt::ItemFlag(Qt::ItemIsUserCheckable | Qt::ItemIsEnabled));
+ Qt::ItemFlags flags(Qt::ItemIsUserCheckable | Qt::ItemIsEnabled);
+ newCheck->setFlags(flags);
newCheck->setCheckState(strg.open ? Qt::Checked : Qt::Unchecked);
stringList->setItem(i, 0, newCheck);
QTableWidgetItem *newPitch = new QTableWidgetItem(midiCodeToStr(strg.pitch));
@@ -168,7 +169,8 @@ void EditStringData::newStringClicked()
_stringsLoc.insert(i, strg);
stringList->insertRow(i);
QTableWidgetItem *newCheck = new QTableWidgetItem();
- newCheck->setFlags(Qt::ItemFlag(Qt::ItemIsUserCheckable | Qt::ItemIsEnabled));
+ Qt::ItemFlags flags(Qt::ItemIsUserCheckable | Qt::ItemIsEnabled);
+ newCheck->setFlags(flags);
newCheck->setCheckState(strg.open ? Qt::Checked : Qt::Unchecked);
stringList->setItem(i, 0, newCheck);
QTableWidgetItem *newPitch = new QTableWidgetItem(midiCodeToStr(strg.pitch));

11
audio/musescore/files/patch-mscore_prefsdialog.ui
View file

@ -1,11 +0,0 @@
--- mscore/prefsdialog.ui.orig 2018-12-11 15:47:09 UTC
+++ mscore/prefsdialog.ui
@@ -4058,7 +4058,7 @@
</item>
</layout>
</widget>
- <pixmapfunction>getPixmap</pixmapfunction>
+ <pixmapfunction></pixmapfunction>
<customwidgets>
<customwidget>
<class>Awl::ColorLabel</class>

12
audio/musescore/files/patch-thirdparty_qzip_qzip.cpp
View file

@ -1,12 +0,0 @@
--- thirdparty/qzip/qzip.cpp.orig 2015-07-16 21:02:34 UTC
+++ thirdparty/qzip/qzip.cpp
@@ -45,6 +45,9 @@
#include "qzipreader_p.h"
#include "qzipwriter_p.h"
+#include <sys/types.h>
+#include <sys/stat.h>
+
#include <zlib.h>
#if defined(Q_OS_WIN) or defined(Q_OS_ANDROID)

238
audio/musescore/pkg-plist
View file

@ -2,6 +2,7 @@ bin/mscore
bin/musescore
man/man1/mscore.1.gz
man/man1/musescore.1.gz
share/appdata/mscore.appdata.xml
share/applications/mscore.desktop
share/icons/hicolor/128x128/apps/mscore.png
share/icons/hicolor/16x16/apps/mscore.png
@ -21,10 +22,23 @@ share/icons/hicolor/scalable/mimetypes/application-vnd.recordare.musicxml.svg
share/icons/hicolor/scalable/mimetypes/application-x-musescore+xml.svg
share/icons/hicolor/scalable/mimetypes/application-x-musescore.svg
share/mime/packages/musescore.xml
%%DATADIR%%/demos/All_Dudes.mscz
%%DATADIR%%/demos/Fugue_1.mscx
%%DATADIR%%/demos/Reunion.mscz
%%DATADIR%%/demos/Triumph.mscz
%%DATADIR%%/demos/Unclaimed_Gift.mscx
%%DATADIR%%/instruments/instruments.xml
%%DATADIR%%/locale/qt_bg.qm
%%DATADIR%%/locale/qt_el.qm
%%DATADIR%%/locale/qt_eu.qm
%%DATADIR%%/locale/qt_gd.qm
%%DATADIR%%/locale/qt_id.qm
%%DATADIR%%/locale/qt_lv.qm
%%DATADIR%%/locale/qt_nb.qm
%%DATADIR%%/locale/qt_nl.qm
%%DATADIR%%/locale/qt_nl_BE.qm
%%DATADIR%%/locale/qt_pt_BR.qm
%%DATADIR%%/locale/qt_ro.qm
%%DATADIR%%/locale/qt_tr.qm
%%DATADIR%%/locale/qt_vi.qm
%%DATADIR%%/locale/instruments_af.qm
%%DATADIR%%/locale/instruments_ar.qm
%%DATADIR%%/locale/instruments_ar_DZ.qm
@ -57,10 +71,13 @@ share/mime/packages/musescore.xml
%%DATADIR%%/locale/instruments_hi_IN.qm
%%DATADIR%%/locale/instruments_hr.qm
%%DATADIR%%/locale/instruments_hu.qm
%%DATADIR%%/locale/instruments_hy.qm
%%DATADIR%%/locale/instruments_id.qm
%%DATADIR%%/locale/instruments_ig.qm
%%DATADIR%%/locale/instruments_it.qm
%%DATADIR%%/locale/instruments_ja.qm
%%DATADIR%%/locale/instruments_ka.qm
%%DATADIR%%/locale/instruments_kab.qm
%%DATADIR%%/locale/instruments_ko.qm
%%DATADIR%%/locale/instruments_lt.qm
%%DATADIR%%/locale/instruments_lv.qm
@ -119,10 +136,13 @@ share/mime/packages/musescore.xml
%%DATADIR%%/locale/mscore_hi_IN.qm
%%DATADIR%%/locale/mscore_hr.qm
%%DATADIR%%/locale/mscore_hu.qm
%%DATADIR%%/locale/mscore_hy.qm
%%DATADIR%%/locale/mscore_id.qm
%%DATADIR%%/locale/mscore_ig.qm
%%DATADIR%%/locale/mscore_it.qm
%%DATADIR%%/locale/mscore_ja.qm
%%DATADIR%%/locale/mscore_ka.qm
%%DATADIR%%/locale/mscore_kab.qm
%%DATADIR%%/locale/mscore_ko.qm
%%DATADIR%%/locale/mscore_lt.qm
%%DATADIR%%/locale/mscore_lv.qm
@ -148,40 +168,70 @@ share/mime/packages/musescore.xml
%%DATADIR%%/locale/mscore_vi.qm
%%DATADIR%%/locale/mscore_zh_CN.qm
%%DATADIR%%/locale/mscore_zh_TW.qm
%%DATADIR%%/locale/qt_ar.qm
%%DATADIR%%/locale/qt_ca.qm
%%DATADIR%%/locale/qt_cs.qm
%%DATADIR%%/locale/qt_da.qm
%%DATADIR%%/locale/qt_de.qm
%%DATADIR%%/locale/qt_el.qm
%%DATADIR%%/locale/qt_es.qm
%%DATADIR%%/locale/qt_eu.qm
%%DATADIR%%/locale/qt_fa.qm
%%DATADIR%%/locale/qt_fi.qm
%%DATADIR%%/locale/qt_fr.qm
%%DATADIR%%/locale/qt_gl.qm
%%DATADIR%%/locale/qt_he.qm
%%DATADIR%%/locale/qt_hu.qm
%%DATADIR%%/locale/qt_id.qm
%%DATADIR%%/locale/qt_it.qm
%%DATADIR%%/locale/qt_ja.qm
%%DATADIR%%/locale/qt_ko.qm
%%DATADIR%%/locale/qt_lt.qm
%%DATADIR%%/locale/qt_nb.qm
%%DATADIR%%/locale/qt_nl.qm
%%DATADIR%%/locale/qt_nl_BE.qm
%%DATADIR%%/locale/qt_pl.qm
%%DATADIR%%/locale/qt_pt.qm
%%DATADIR%%/locale/qt_pt_BR.qm
%%DATADIR%%/locale/qt_ro.qm
%%DATADIR%%/locale/qt_ru.qm
%%DATADIR%%/locale/qt_sk.qm
%%DATADIR%%/locale/qt_sv.qm
%%DATADIR%%/locale/qt_tr.qm
%%DATADIR%%/locale/qt_uk.qm
%%DATADIR%%/locale/qt_vi.qm
%%DATADIR%%/locale/qt_zh_CN.qm
%%DATADIR%%/locale/qt_zh_TW.qm
%%DATADIR%%/locale/tours_af.qm
%%DATADIR%%/locale/tours_ar.qm
%%DATADIR%%/locale/tours_ar_DZ.qm
%%DATADIR%%/locale/tours_ar_EG.qm
%%DATADIR%%/locale/tours_ar_SD.qm
%%DATADIR%%/locale/tours_ast.qm
%%DATADIR%%/locale/tours_be.qm
%%DATADIR%%/locale/tours_bg.qm
%%DATADIR%%/locale/tours_ca.qm
%%DATADIR%%/locale/tours_ca@valencia.qm
%%DATADIR%%/locale/tours_cs.qm
%%DATADIR%%/locale/tours_cy.qm
%%DATADIR%%/locale/tours_da.qm
%%DATADIR%%/locale/tours_de.qm
%%DATADIR%%/locale/tours_el.qm
%%DATADIR%%/locale/tours_en.qm
%%DATADIR%%/locale/tours_en_GB.qm
%%DATADIR%%/locale/tours_en_US.qm
%%DATADIR%%/locale/tours_eo.qm
%%DATADIR%%/locale/tours_es.qm
%%DATADIR%%/locale/tours_et.qm
%%DATADIR%%/locale/tours_eu.qm
%%DATADIR%%/locale/tours_fa.qm
%%DATADIR%%/locale/tours_fi.qm
%%DATADIR%%/locale/tours_fo.qm
%%DATADIR%%/locale/tours_ga.qm
%%DATADIR%%/locale/tours_gd.qm
%%DATADIR%%/locale/tours_gl.qm
%%DATADIR%%/locale/tours_he.qm
%%DATADIR%%/locale/tours_hi_IN.qm
%%DATADIR%%/locale/tours_hr.qm
%%DATADIR%%/locale/tours_hu.qm
%%DATADIR%%/locale/tours_hy.qm
%%DATADIR%%/locale/tours_id.qm
%%DATADIR%%/locale/tours_ig.qm
%%DATADIR%%/locale/tours_it.qm
%%DATADIR%%/locale/tours_ja.qm
%%DATADIR%%/locale/tours_ka.qm
%%DATADIR%%/locale/tours_kab.qm
%%DATADIR%%/locale/tours_ko.qm
%%DATADIR%%/locale/tours_lt.qm
%%DATADIR%%/locale/tours_lv.qm
%%DATADIR%%/locale/tours_ml.qm
%%DATADIR%%/locale/tours_mn_MN.qm
%%DATADIR%%/locale/tours_nb.qm
%%DATADIR%%/locale/tours_nl.qm
%%DATADIR%%/locale/tours_nn.qm
%%DATADIR%%/locale/tours_pl.qm
%%DATADIR%%/locale/tours_pt.qm
%%DATADIR%%/locale/tours_pt_BR.qm
%%DATADIR%%/locale/tours_ro.qm
%%DATADIR%%/locale/tours_ru.qm
%%DATADIR%%/locale/tours_sk.qm
%%DATADIR%%/locale/tours_sl.qm
%%DATADIR%%/locale/tours_sr.qm
%%DATADIR%%/locale/tours_sr_RS.qm
%%DATADIR%%/locale/tours_sv.qm
%%DATADIR%%/locale/tours_th.qm
%%DATADIR%%/locale/tours_tr.qm
%%DATADIR%%/locale/tours_uk.qm
%%DATADIR%%/locale/tours_uz@Latn.qm
%%DATADIR%%/locale/tours_vi.qm
%%DATADIR%%/locale/tours_zh_CN.qm
%%DATADIR%%/locale/tours_zh_TW.qm
%%DATADIR%%/manual/plugins/accidental.html
%%DATADIR%%/manual/plugins/ambitus.html
%%DATADIR%%/manual/plugins/arpeggio.html
@ -198,6 +248,9 @@ share/mime/packages/musescore.xml
%%DATADIR%%/manual/plugins/chordrest.html
%%DATADIR%%/manual/plugins/clef.html
%%DATADIR%%/manual/plugins/compound.html
%%DATADIR%%/manual/plugins/connectorinfo.html
%%DATADIR%%/manual/plugins/connectorinforeader.html
%%DATADIR%%/manual/plugins/connectorinfowriter.html
%%DATADIR%%/manual/plugins/cursor.html
%%DATADIR%%/manual/plugins/durationelement.html
%%DATADIR%%/manual/plugins/dynamic.html
@ -210,7 +263,6 @@ share/mime/packages/musescore.xml
%%DATADIR%%/manual/plugins/fingering.html
%%DATADIR%%/manual/plugins/fretdiagram.html
%%DATADIR%%/manual/plugins/fsymbol.html
%%DATADIR%%/manual/plugins/glissando.html
%%DATADIR%%/manual/plugins/glissandosegment.html
%%DATADIR%%/manual/plugins/groups.html
%%DATADIR%%/manual/plugins/hairpin.html
@ -224,15 +276,14 @@ share/mime/packages/musescore.xml
%%DATADIR%%/manual/plugins/keysig.html
%%DATADIR%%/manual/plugins/layoutbreak.html
%%DATADIR%%/manual/plugins/ledgerline.html
%%DATADIR%%/manual/plugins/line.html
%%DATADIR%%/manual/plugins/letring.html
%%DATADIR%%/manual/plugins/letringsegment.html
%%DATADIR%%/manual/plugins/linesegment.html
%%DATADIR%%/manual/plugins/lyrics.html
%%DATADIR%%/manual/plugins/manual.css
%%DATADIR%%/manual/plugins/marker.html
%%DATADIR%%/manual/plugins/measure.html
%%DATADIR%%/manual/plugins/measurebase.html
%%DATADIR%%/manual/plugins/mscore.png
%%DATADIR%%/manual/plugins/mtext.html
%%DATADIR%%/manual/plugins/musescore.html
%%DATADIR%%/manual/plugins/note.html
%%DATADIR%%/manual/plugins/notedot.html
@ -243,6 +294,8 @@ share/mime/packages/musescore.xml
%%DATADIR%%/manual/plugins/ottavasegment.html
%%DATADIR%%/manual/plugins/page.html
%%DATADIR%%/manual/plugins/pageformat.html
%%DATADIR%%/manual/plugins/palmmute.html
%%DATADIR%%/manual/plugins/palmmutesegment.html
%%DATADIR%%/manual/plugins/part.html
%%DATADIR%%/manual/plugins/pedal.html
%%DATADIR%%/manual/plugins/pedalsegment.html
@ -263,17 +316,19 @@ share/mime/packages/musescore.xml
%%DATADIR%%/manual/plugins/spannersegment.html
%%DATADIR%%/manual/plugins/stafflines.html
%%DATADIR%%/manual/plugins/staffstate.html
%%DATADIR%%/manual/plugins/stafftext.html
%%DATADIR%%/manual/plugins/stafftypechange.html
%%DATADIR%%/manual/plugins/stem.html
%%DATADIR%%/manual/plugins/stemslash.html
%%DATADIR%%/manual/plugins/svggenerator.html
%%DATADIR%%/manual/plugins/symbol.html
%%DATADIR%%/manual/plugins/system.html
%%DATADIR%%/manual/plugins/tbox.html
%%DATADIR%%/manual/plugins/tempotext.html
%%DATADIR%%/manual/plugins/textline.html
%%DATADIR%%/manual/plugins/textlinebase.html
%%DATADIR%%/manual/plugins/textlinebasesegment.html
%%DATADIR%%/manual/plugins/textlinesegment.html
%%DATADIR%%/manual/plugins/tie.html
%%DATADIR%%/manual/plugins/tiesegment.html
%%DATADIR%%/manual/plugins/timesig.html
%%DATADIR%%/manual/plugins/tremolo.html
%%DATADIR%%/manual/plugins/tremolobar.html
@ -281,6 +336,7 @@ share/mime/packages/musescore.xml
%%DATADIR%%/manual/plugins/trillsegment.html
%%DATADIR%%/manual/plugins/tuplet.html
%%DATADIR%%/manual/plugins/vbox.html
%%DATADIR%%/manual/plugins/vibratosegment.html
%%DATADIR%%/manual/plugins/volta.html
%%DATADIR%%/manual/plugins/voltasegment.html
%%DATADIR%%/plugins/abc_import.qml
@ -297,8 +353,8 @@ share/mime/packages/musescore.xml
%%DATADIR%%/plugins/scorelist.qml
%%DATADIR%%/plugins/view.qml
%%DATADIR%%/plugins/walk.qml
%%DATADIR%%/sound/FluidR3Mono_GM.sf3
%%DATADIR%%/sound/FluidR3Mono_License.md
%%DATADIR%%/sound/MuseScore_General-License.md
%%DATADIR%%/sound/MuseScore_General.sf3
%%DATADIR%%/styles/MuseJazz.mss
%%DATADIR%%/styles/cchords_muse.xml
%%DATADIR%%/styles/cchords_nrb.xml
@ -309,50 +365,64 @@ share/mime/packages/musescore.xml
%%DATADIR%%/styles/chords_std.xml
%%DATADIR%%/styles/jazzchords.xml
%%DATADIR%%/styles/stdchords.xml
%%DATADIR%%/templates/01-General/00-Blank.mscz
%%DATADIR%%/templates/01-General/01-Treble_Clef.mscz
%%DATADIR%%/templates/01-General/02-Bass_Clef.mscz
%%DATADIR%%/templates/01-General/03-Grand_Staff.mscz
%%DATADIR%%/templates/02-Choral/01-SATB.mscz
%%DATADIR%%/templates/02-Choral/02-SATB_+_Organ.mscz
%%DATADIR%%/templates/02-Choral/03-SATB_+_Piano.mscz
%%DATADIR%%/templates/02-Choral/04-SATB_Closed_Score.mscz
%%DATADIR%%/templates/02-Choral/05-SATB_Closed_Score_+_Organ.mscz
%%DATADIR%%/templates/02-Choral/06-SATB_Closed_Score_+_Piano.mscz
%%DATADIR%%/templates/02-Choral/07-Voice_+_Piano.mscz
%%DATADIR%%/templates/02-Choral/08-Barbershop_Quartet.mscz
%%DATADIR%%/templates/02-Choral/09-Liturgical_Unmetrical.mscz
%%DATADIR%%/templates/02-Choral/10-Liturgical_Unmetrical_+_Organ.mscz
%%DATADIR%%/templates/03-Chamber_Music/01-String_Quartet.mscz
%%DATADIR%%/templates/03-Chamber_Music/02-Wind_Quartet.mscz
%%DATADIR%%/templates/03-Chamber_Music/03-Wind_Quintet.mscz
%%DATADIR%%/templates/03-Chamber_Music/04-Saxophone_Quartet.mscz
%%DATADIR%%/templates/03-Chamber_Music/05-Brass_Quartet.mscz
%%DATADIR%%/templates/03-Chamber_Music/06-Brass_Quintet.mscz
%%DATADIR%%/templates/04-Solo/01-Guitar.mscz
%%DATADIR%%/templates/04-Solo/02-Guitar_+_Tablature.mscz
%%DATADIR%%/templates/04-Solo/03-Guitar_Tablature.mscz
%%DATADIR%%/templates/04-Solo/04-Piano.mscz
%%DATADIR%%/templates/05-Jazz/01-Jazz_Lead_Sheet.mscz
%%DATADIR%%/templates/05-Jazz/02-Big_Band.mscz
%%DATADIR%%/templates/05-Jazz/03-Jazz_Combo.mscz
%%DATADIR%%/templates/06-Popular/01-Rock_Band.mscz
%%DATADIR%%/templates/06-Popular/02-Bluegrass_Band.mscz
%%DATADIR%%/templates/07-Band_and_Percussion/01-Concert_Band.mscz
%%DATADIR%%/templates/07-Band_and_Percussion/02-Small_Concert_Band.mscz
%%DATADIR%%/templates/07-Band_and_Percussion/03-Brass_Band.mscz
%%DATADIR%%/templates/07-Band_and_Percussion/04-Marching_Band.mscz
%%DATADIR%%/templates/07-Band_and_Percussion/05-Small_Marching_Band.mscz
%%DATADIR%%/templates/07-Band_and_Percussion/06-Battery_Percussion.mscz
%%DATADIR%%/templates/07-Band_and_Percussion/07-Large_Pit_Percussion.mscz
%%DATADIR%%/templates/07-Band_and_Percussion/08-Small_Pit_Percussion.mscz
%%DATADIR%%/templates/08-Orchestral/01-Classical_Orchestra.mscz
%%DATADIR%%/templates/08-Orchestral/02-Concert_Orchestra.mscz
%%DATADIR%%/templates/08-Orchestral/03-String_Orchestra.mscz
%%DATADIR%%/templates/01-General/00-Blank.mscx
%%DATADIR%%/templates/01-General/01-Treble_Clef.mscx
%%DATADIR%%/templates/01-General/02-Bass_Clef.mscx
%%DATADIR%%/templates/01-General/03-Grand_Staff.mscx
%%DATADIR%%/templates/02-Choral/01-SATB.mscx
%%DATADIR%%/templates/02-Choral/02-SATB_+_Organ.mscx
%%DATADIR%%/templates/02-Choral/03-SATB_+_Piano.mscx
%%DATADIR%%/templates/02-Choral/04-SATB_Closed_Score.mscx
%%DATADIR%%/templates/02-Choral/05-SATB_Closed_Score_+_Organ.mscx
%%DATADIR%%/templates/02-Choral/06-SATB_Closed_Score_+_Piano.mscx
%%DATADIR%%/templates/02-Choral/07-Voice_+_Piano.mscx
%%DATADIR%%/templates/02-Choral/08-Barbershop_Quartet.mscx
%%DATADIR%%/templates/02-Choral/09-Liturgical_Unmetrical.mscx
%%DATADIR%%/templates/02-Choral/10-Liturgical_Unmetrical_+_Organ.mscx
%%DATADIR%%/templates/03-Chamber_Music/01-String_Quartet.mscx
%%DATADIR%%/templates/03-Chamber_Music/02-Wind_Quartet.mscx
%%DATADIR%%/templates/03-Chamber_Music/03-Wind_Quintet.mscx
%%DATADIR%%/templates/03-Chamber_Music/04-Saxophone_Quartet.mscx
%%DATADIR%%/templates/03-Chamber_Music/05-Brass_Quartet.mscx
%%DATADIR%%/templates/03-Chamber_Music/06-Brass_Quintet.mscx
%%DATADIR%%/templates/04-Solo/01-Guitar.mscx
%%DATADIR%%/templates/04-Solo/02-Guitar_+_Tablature.mscx
%%DATADIR%%/templates/04-Solo/03-Guitar_Tablature.mscx
%%DATADIR%%/templates/04-Solo/04-Piano.mscx
%%DATADIR%%/templates/05-Jazz/01-Jazz_Lead_Sheet.mscx
%%DATADIR%%/templates/05-Jazz/02-Big_Band.mscx
%%DATADIR%%/templates/05-Jazz/03-Jazz_Combo.mscx
%%DATADIR%%/templates/06-Popular/01-Rock_Band.mscx
%%DATADIR%%/templates/06-Popular/02-Bluegrass_Band.mscx
%%DATADIR%%/templates/07-Band_and_Percussion/01-Concert_Band.mscx
%%DATADIR%%/templates/07-Band_and_Percussion/02-Small_Concert_Band.mscx
%%DATADIR%%/templates/07-Band_and_Percussion/03-Brass_Band.mscx
%%DATADIR%%/templates/07-Band_and_Percussion/04-Marching_Band.mscx
%%DATADIR%%/templates/07-Band_and_Percussion/05-Small_Marching_Band.mscx
%%DATADIR%%/templates/07-Band_and_Percussion/06-Battery_Percussion.mscx
%%DATADIR%%/templates/07-Band_and_Percussion/07-Large_Pit_Percussion.mscx
%%DATADIR%%/templates/07-Band_and_Percussion/08-Small_Pit_Percussion.mscx
%%DATADIR%%/templates/08-Orchestral/01-Classical_Orchestra.mscx
%%DATADIR%%/templates/08-Orchestral/02-Symphony_Orchestra.mscx
%%DATADIR%%/templates/08-Orchestral/03-String_Orchestra.mscx
%%DATADIR%%/templates/drumset_fr.drm
%%DATADIR%%/templates/orchestral.drm
%%DATADIR%%/tours/autoplace.tour
%%DATADIR%%/tours/inspector.tour
%%DATADIR%%/tours/mmrest.tour
%%DATADIR%%/tours/navigate.tour
%%DATADIR%%/tours/noteinput.tour
%%DATADIR%%/tours/palette.tour
%%DATADIR%%/tours/select.tour
%%DATADIR%%/tours/timeline.tour
%%DATADIR%%/tours/welcome.tour
%%DATADIR%%/wallpaper/background1.png
%%DATADIR%%/wallpaper/paper1.png
%%DATADIR%%/wallpaper/paper2.png
%%DATADIR%%/wallpaper/paper3.png
%%DATADIR%%/wallpaper/paper4.png
%%DATADIR%%/wallpaper/paper5.png
%%DATADIR%%/wallpaper/paper6.png
%%DATADIR%%/wallpaper/paper7.png
%%DATADIR%%/workspaces/Advanced.workspace
%%DATADIR%%/workspaces/Basic.workspace

4
audio/py-pylast/Makefile
View file

@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= pylast
PORTVERSION= 2.4.0
PORTVERSION= 3.0.0
CATEGORIES= audio python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
@ -15,7 +15,7 @@ LICENSE_FILE= ${WRKSRC}/COPYING
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}six>0:devel/py-six@${PY_FLAVOR}
USES= python
USES= python:3.5+
USE_PYTHON= distutils autoplist
.include <bsd.port.mk>

6
audio/py-pylast/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1539324799
SHA256 (pylast-2.4.0.tar.gz) = 8e883f13b70c3879fc821bbee1accf27ea4e68898f4462cbbe358f615adcbbfb
SIZE (pylast-2.4.0.tar.gz) = 34527
TIMESTAMP = 1547174942
SHA256 (pylast-3.0.0.tar.gz) = 24051c52011ff18bdeaee9df084ecc90da6c627da86f3cdcfec4af2928e9bc56
SIZE (pylast-3.0.0.tar.gz) = 34416

5
benchmarks/vegeta/Makefile
View file

@ -2,7 +2,7 @@
PORTNAME= vegeta
DISTVERSIONPREFIX= cli/v
DISTVERSION= 12.1.0
DISTVERSION= 12.2.0
CATEGORIES= benchmarks www
MAINTAINER= egypcio@FreeBSD.org
@ -39,8 +39,7 @@ do-build:
@cd ${WRKSRC} && \
${SETENV} ${MAKE_ENV} ${GO_ENV} CGO_ENABLED=0 GOPATH=${WRKSRC} \
${GO_CMD} build -v -a -tags=netgo -ldflags \
'-s -w -extldflags "-static" -X main.Version=${DISTVERSION} -X main.Date=20180818' \
-o bin/${PORTNAME}
'-s -w -extldflags "-static" -X main.Version=${DISTVERSION}' -o bin/${PORTNAME}
do-install:
${INSTALL_PROGRAM} ${WRKSRC}/bin/${PORTNAME} ${STAGEDIR}/${LOCALBASE}/bin

6
benchmarks/vegeta/distinfo
View file

@ -1,6 +1,6 @@
TIMESTAMP = 1541421776
SHA256 (tsenart-vegeta-cli-v12.1.0_GH0.tar.gz) = 7b1fc6c2cbac2ffbd32f340b8b1ea862c7b285f0078ac3000dcc07c55fdd1e96
SIZE (tsenart-vegeta-cli-v12.1.0_GH0.tar.gz) = 479350
TIMESTAMP = 1546709357
SHA256 (tsenart-vegeta-cli-v12.2.0_GH0.tar.gz) = 2e4334132b1311cbca83bea6336e8877a380bee28b8612f2c9583df4597fd19e
SIZE (tsenart-vegeta-cli-v12.2.0_GH0.tar.gz) = 480651
SHA256 (alecthomas-jsonschema-f2c9385_GH0.tar.gz) = e95ce4279470c9da271c494ac9b00fc6c3c8975c9e685ca4ae926a6201deaab1
SIZE (alecthomas-jsonschema-f2c9385_GH0.tar.gz) = 7341
SHA256 (c2h5oh-datasize-4eba002_GH0.tar.gz) = c0e504d28864f6c25eb09afcf292aea5a7499df3b2d3e13a9ddecd3bc5ef98ae

1
biology/Makefile
View file

@ -45,6 +45,7 @@
SUBDIR += grappa
SUBDIR += groopm
SUBDIR += hmmer
SUBDIR += hisat2
SUBDIR += htslib
SUBDIR += hyphy
SUBDIR += igv

30
biology/hisat2/Makefile Normal file
View file

@ -0,0 +1,30 @@
# $FreeBSD$
PORTNAME= hisat2
DISTVERSION= 2.1.0-23
DISTVERSIONSUFFIX= -g20f333e
CATEGORIES= biology perl5 python
MAINTAINER= jwb@FreeBSD.org
COMMENT= Alignment program for mapping next-generation sequencing reads
LICENSE= GPLv3
LICENSE_FILE= ${WRKSRC}/LICENSE
# May work on other 64-bit archs, untested
ONLY_FOR_ARCHS= amd64
ONLY_FOR_ARCHS_REASON= 64-bit code, some assembly language
USES= gmake perl5 python shebangfix
USE_GITHUB= yes
SHEBANG_FILES= hisat2 hisat2-build hisat2-inspect *.py \
scripts/*.sh scripts/*.pl \
hisatgenotype_modules/*.py \
hisatgenotype_scripts/*.py \
hisatgenotype_scripts/*.sh
GH_ACCOUNT= infphilo
MAKEFILE= ${FILESDIR}/Makefile.pkg
.include <bsd.port.mk>

3
biology/hisat2/distinfo Normal file
View file

@ -0,0 +1,3 @@
TIMESTAMP = 1547001889
SHA256 (infphilo-hisat2-2.1.0-23-g20f333e_GH0.tar.gz) = 7327fa50f51cd1a0fefe1a379cfeb2f06eefdbbe8f49b04b0d79332080f6be57
SIZE (infphilo-hisat2-2.1.0-23-g20f333e_GH0.tar.gz) = 3972398

446
biology/hisat2/files/Makefile.pkg Normal file
View file

@ -0,0 +1,446 @@
#
# Generic Makefile for package managers
# J Bacon <bacon4000@gmail.com>
#
# This Makefile respects standard make variables provided by package
# managers, such as CXX, CXXFLAGS, etc. It is intended to work on
# any POSIX platform. Default behaviour should be similar to the
# original Makefile.
#
# This file is part of HISAT2.
#
# HISAT 2 is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# HISAT 2 is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with HISAT. If not, see <http://www.gnu.org/licenses/>.
#
INC =
GCC_PREFIX = $(shell dirname `which gcc`)
GCC_SUFFIX =
CC ?= $(GCC_PREFIX)/gcc$(GCC_SUFFIX)
CPP ?= $(GCC_PREFIX)/g++$(GCC_SUFFIX)
CXX ?= $(CPP)
CXXFLAGS ?= -O2 -Wall
INSTALL ?= install
HEADERS = $(wildcard *.h)
BOWTIE_MM = 1
BOWTIE_SHARED_MEM = 0
MACOS = 0
ifneq (,$(findstring Darwin,$(shell uname)))
MACOS = 1
endif
# EXTRA_FLAGS += -DPOPCNT_CAPABILITY
INC += -I third_party
MM_DEF =
ifeq (1,$(BOWTIE_MM))
MM_DEF = -DBOWTIE_MM
endif
SHMEM_DEF =
ifeq (1,$(BOWTIE_SHARED_MEM))
SHMEM_DEF = -DBOWTIE_SHARED_MEM
endif
PTHREAD_PKG =
PTHREAD_LIB = -lpthread
SEARCH_LIBS =
BUILD_LIBS =
INSPECT_LIBS =
USE_SRA = 0
SRA_DEF =
SRA_LIB =
SERACH_INC =
ifeq (1,$(USE_SRA))
SRA_DEF = -DUSE_SRA
SRA_LIB = -lncbi-ngs-c++-static -lngs-c++-static -lncbi-vdb-static -ldl
SEARCH_INC += -I$(NCBI_NGS_DIR)/include -I$(NCBI_VDB_DIR)/include
SEARCH_LIBS += -L$(NCBI_NGS_DIR)/lib64 -L$(NCBI_VDB_DIR)/lib64
endif
LIBS = $(PTHREAD_LIB)
SHARED_CPPS = ccnt_lut.cpp ref_read.cpp alphabet.cpp shmem.cpp \
edit.cpp gfm.cpp \
reference.cpp ds.cpp multikey_qsort.cpp limit.cpp \
random_source.cpp tinythread.cpp
SEARCH_CPPS = qual.cpp pat.cpp \
read_qseq.cpp aligner_seed_policy.cpp \
aligner_seed.cpp \
aligner_seed2.cpp \
aligner_sw.cpp \
aligner_sw_driver.cpp aligner_cache.cpp \
aligner_result.cpp ref_coord.cpp mask.cpp \
pe.cpp aln_sink.cpp dp_framer.cpp \
scoring.cpp presets.cpp unique.cpp \
simple_func.cpp \
random_util.cpp \
aligner_bt.cpp sse_util.cpp \
aligner_swsse.cpp outq.cpp \
aligner_swsse_loc_i16.cpp \
aligner_swsse_ee_i16.cpp \
aligner_swsse_loc_u8.cpp \
aligner_swsse_ee_u8.cpp \
aligner_driver.cpp \
splice_site.cpp
SEARCH_OBJS = qual.o pat.o \
read_qseq.o aligner_seed_policy.o \
aligner_seed.o \
aligner_seed2.o \
aligner_sw.o \
aligner_sw_driver.o aligner_cache.o \
aligner_result.o ref_coord.o mask.o \
pe.o aln_sink.o dp_framer.o \
scoring.o presets.o unique.o \
simple_func.o \
random_util.o \
aligner_bt.o sse_util.o \
aligner_swsse.o outq.o \
aligner_swsse_loc_i16.o \
aligner_swsse_ee_i16.o \
aligner_swsse_loc_u8.o \
aligner_swsse_ee_u8.o \
aligner_driver.o \
splice_site.o
BUILD_CPPS = diff_sample.cpp
HISAT2_CPPS_MAIN = $(SEARCH_CPPS) hisat2_main.cpp
HISAT2_BUILD_CPPS_MAIN = $(BUILD_CPPS) hisat2_build_main.cpp
SEARCH_FRAGMENTS = $(wildcard search_*_phase*.c)
VERSION = $(shell cat VERSION)
DEBUG_FLAGS = $(CXXFLAGS) -O0 -g3
DEBUG_DEFS = -DCOMPILER_OPTIONS="\"$(DEBUG_FLAGS) $(EXTRA_FLAGS)\""
RELEASE_FLAGS = $(CXXFLAGS)
RELEASE_DEFS = -DCOMPILER_OPTIONS="\"$(RELEASE_FLAGS) $(EXTRA_FLAGS)\""
NOASSERT_FLAGS = -DNDEBUG
FILE_FLAGS = -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D_GNU_SOURCE
ifeq (1,$(USE_SRA))
ifeq (1, $(MACOS))
DEBUG_FLAGS += -mmacosx-version-min=10.6
RELEASE_FLAGS += -mmacosx-version-min=10.6
endif
endif
HISAT2_BIN_LIST = hisat2-build-s \
hisat2-build-l \
hisat2-align-s \
hisat2-align-l \
hisat2-inspect-s \
hisat2-inspect-l
HISAT2_BIN_LIST_AUX = hisat2-build-s-debug \
hisat2-build-l-debug \
hisat2-align-s-debug \
hisat2-align-l-debug \
hisat2-inspect-s-debug \
hisat2-inspect-l-debug
GENERAL_LIST = $(wildcard scripts/*.sh) \
$(wildcard scripts/*.pl) \
$(wildcard *.py) \
$(wildcard hisatgenotype_modules/*.py) \
$(wildcard hisatgenotype_scripts/*.py) \
doc/manual.inc.html \
doc/README \
doc/style.css \
$(wildcard example/index/*.ht2) \
$(wildcard example/reads/*.fa) \
example/reference/22_20-21M.fa \
example/reference/22_20-21M.snp \
$(PTHREAD_PKG) \
hisat2 \
hisat2-build \
hisat2-inspect \
AUTHORS \
LICENSE \
NEWS \
MANUAL \
MANUAL.markdown \
TUTORIAL \
VERSION
ifeq (1,$(WINDOWS))
HISAT2_BIN_LIST := $(HISAT2_BIN_LIST) hisat2.bat hisat2-build.bat hisat2-inspect.bat
endif
# This is helpful on Windows under MinGW/MSYS, where Make might go for
# the Windows FIND tool instead.
FIND=$(shell which find)
SRC_PKG_LIST = $(wildcard *.h) \
$(wildcard *.hh) \
$(wildcard *.c) \
$(wildcard *.cpp) \
doc/strip_markdown.pl \
Makefile \
$(GENERAL_LIST)
BIN_PKG_LIST = $(GENERAL_LIST)
.PHONY: all allall both both-debug install
all: $(HISAT2_BIN_LIST)
allall: $(HISAT2_BIN_LIST) $(HISAT2_BIN_LIST_AUX)
both: hisat2-align-s hisat2-align-l hisat2-build-s hisat2-build-l
both-debug: hisat2-align-s-debug hisat2-align-l-debug hisat2-build-s-debug hisat2-build-l-debug
DEFS=-fno-strict-aliasing \
-DHISAT2_VERSION="\"`cat VERSION`\"" \
-DBUILD_HOST="\"`hostname`\"" \
-DBUILD_TIME="\"`date`\"" \
-DCOMPILER_VERSION="\"`$(CXX) -v 2>&1 | tail -1`\"" \
$(FILE_FLAGS) \
$(PREF_DEF) \
$(MM_DEF) \
$(SHMEM_DEF)
#
# hisat-bp targets
#
hisat-bp-bin: hisat_bp.cpp $(SEARCH_CPPS) $(SHARED_CPPS) $(HEADERS) $(SEARCH_FRAGMENTS)
$(CXX) $(RELEASE_FLAGS) $(RELEASE_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 $(NOASSERT_FLAGS) \
$(INC) \
-o $@ $< \
$(SHARED_CPPS) $(HISAT_CPPS_MAIN) \
$(LIBS) $(SEARCH_LIBS)
hisat-bp-bin-debug: hisat_bp.cpp $(SEARCH_CPPS) $(SHARED_CPPS) $(HEADERS) $(SEARCH_FRAGMENTS)
$(CXX) $(DEBUG_FLAGS) \
$(DEBUG_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 \
$(INC) \
-o $@ $< \
$(SHARED_CPPS) $(HISAT_CPPS_MAIN) \
$(LIBS) $(SEARCH_LIBS)
#
# hisat2-build targets
#
hisat2-build-s: hisat2_build.cpp $(SHARED_CPPS) $(HEADERS)
$(CXX) $(RELEASE_FLAGS) $(RELEASE_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 $(NOASSERT_FLAGS) -DMASSIVE_DATA_RLCSA \
$(INC) \
-o $@ $< \
$(SHARED_CPPS) $(HISAT2_BUILD_CPPS_MAIN) \
$(LIBS) $(BUILD_LIBS)
hisat2-build-l: hisat2_build.cpp $(SHARED_CPPS) $(HEADERS)
$(CXX) $(RELEASE_FLAGS) $(RELEASE_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 -DBOWTIE_64BIT_INDEX $(NOASSERT_FLAGS) \
$(INC) \
-o $@ $< \
$(SHARED_CPPS) $(HISAT2_BUILD_CPPS_MAIN) \
$(LIBS) $(BUILD_LIBS)
hisat2-build-s-debug: hisat2_build.cpp $(SHARED_CPPS) $(HEADERS)
$(CXX) $(DEBUG_FLAGS) $(DEBUG_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 -DMASSIVE_DATA_RLCSA \
$(INC) \
-o $@ $< \
$(SHARED_CPPS) $(HISAT2_BUILD_CPPS_MAIN) \
$(LIBS) $(BUILD_LIBS)
hisat2-build-l-debug: hisat2_build.cpp $(SHARED_CPPS) $(HEADERS)
$(CXX) $(DEBUG_FLAGS) $(DEBUG_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 -DBOWTIE_64BIT_INDEX \
$(INC) \
-o $@ $< \
$(SHARED_CPPS) $(HISAT2_BUILD_CPPS_MAIN) \
$(LIBS) $(BUILD_LIBS)
#
# hisat2 targets
#
hisat2-align-s: hisat2.cpp $(SEARCH_CPPS) $(SHARED_CPPS) $(HEADERS) $(SEARCH_FRAGMENTS)
$(CXX) $(RELEASE_FLAGS) $(RELEASE_DEFS) $(EXTRA_FLAGS) \
$(DEFS) $(SRA_DEF) -DBOWTIE2 $(NOASSERT_FLAGS) \
$(INC) $(SEARCH_INC) \
-o $@ $< \
$(SHARED_CPPS) $(HISAT2_CPPS_MAIN) \
$(LIBS) $(SRA_LIB) $(SEARCH_LIBS)
hisat2-align-l: hisat2.cpp $(SEARCH_CPPS) $(SHARED_CPPS) $(HEADERS) $(SEARCH_FRAGMENTS)
$(CXX) $(RELEASE_FLAGS) $(RELEASE_DEFS) $(EXTRA_FLAGS) \
$(DEFS) $(SRA_DEF) -DBOWTIE2 -DBOWTIE_64BIT_INDEX $(NOASSERT_FLAGS) \
$(INC) $(SEARCH_INC) \
-o $@ $< \
$(SHARED_CPPS) $(HISAT2_CPPS_MAIN) \
$(LIBS) $(SRA_LIB) $(SEARCH_LIBS)
hisat2-align-s-debug: hisat2.cpp $(SEARCH_CPPS) $(SHARED_CPPS) $(HEADERS) $(SEARCH_FRAGMENTS)
$(CXX) $(DEBUG_FLAGS) \
$(DEBUG_DEFS) $(EXTRA_FLAGS) \
$(DEFS) $(SRA_DEF) -DBOWTIE2 \
$(INC) $(SEARCH_INC) \
-o $@ $< \
$(SHARED_CPPS) $(HISAT2_CPPS_MAIN) \
$(LIBS) $(SRA_LIB) $(SEARCH_LIBS)
hisat2-align-l-debug: hisat2.cpp $(SEARCH_CPPS) $(SHARED_CPPS) $(HEADERS) $(SEARCH_FRAGMENTS)
$(CXX) $(DEBUG_FLAGS) \
$(DEBUG_DEFS) $(EXTRA_FLAGS) \
$(DEFS) $(SRA_DEF) -DBOWTIE2 -DBOWTIE_64BIT_INDEX \
$(INC) $(SEARCH_INC) \
-o $@ $< \
$(SHARED_CPPS) $(HISAT2_CPPS_MAIN) \
$(LIBS) $(SRA_LIB) $(SEARCH_LIBS)
#
# hisat2-inspect targets
#
hisat2-inspect-s: hisat2_inspect.cpp $(HEADERS) $(SHARED_CPPS)
$(CXX) $(RELEASE_FLAGS) \
$(RELEASE_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 -DHISAT2_INSPECT_MAIN \
$(INC) -I . \
-o $@ $< \
$(SHARED_CPPS) \
$(LIBS) $(INSPECT_LIBS)
hisat2-inspect-l: hisat2_inspect.cpp $(HEADERS) $(SHARED_CPPS)
$(CXX) $(RELEASE_FLAGS) \
$(RELEASE_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 -DBOWTIE_64BIT_INDEX -DHISAT2_INSPECT_MAIN \
$(INC) -I . \
-o $@ $< \
$(SHARED_CPPS) \
$(LIBS) $(INSPECT_LIBS)
hisat2-inspect-s-debug: hisat2_inspect.cpp $(HEADERS) $(SHARED_CPPS)
$(CXX) $(DEBUG_FLAGS) \
$(DEBUG_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 -DHISAT2_INSPECT_MAIN \
$(INC) -I . \
-o $@ $< \
$(SHARED_CPPS) \
$(LIBS) $(INSPECT_LIBS)
hisat2-inspect-l-debug: hisat2_inspect.cpp $(HEADERS) $(SHARED_CPPS)
$(CXX) $(DEBUG_FLAGS) \
$(DEBUG_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 -DBOWTIE_64BIT_INDEX -DHISAT2_INSPECT_MAIN \
$(INC) -I . \
-o $@ $< \
$(SHARED_CPPS) \
$(LIBS) $(INSPECT_LIBS)
%.o: %.cpp
$(CXX) -c $(RELEASE_FLAGS) \
$(RELEASE_DEFS) $(EXTRA_FLAGS) \
$(DEFS) -DBOWTIE2 -DHISAT2_INSPECT_MAIN \
$(INC) -I . $< -o $@ $<
hisat2: ;
hisat2.bat:
echo "@echo off" > hisat2.bat
echo "perl %~dp0/hisat2 %*" >> hisat2.bat
hisat2-build.bat:
echo "@echo off" > hisat2-build.bat
echo "python %~dp0/hisat2-build %*" >> hisat2-build.bat
hisat2-inspect.bat:
echo "@echo off" > hisat2-inspect.bat
echo "python %~dp0/hisat2-inspect %*" >> hisat2-inspect.bat
.PHONY: hisat2-src
hisat2-src: $(SRC_PKG_LIST)
chmod a+x scripts/*.sh scripts/*.pl
mkdir .src.tmp
mkdir .src.tmp/hisat2-$(VERSION)
zip tmp.zip $(SRC_PKG_LIST)
mv tmp.zip .src.tmp/hisat2-$(VERSION)
cd .src.tmp/hisat2-$(VERSION) ; unzip tmp.zip ; rm -f tmp.zip
cd .src.tmp ; zip -r hisat2-$(VERSION)-source.zip hisat2-$(VERSION)
cp .src.tmp/hisat2-$(VERSION)-source.zip .
rm -rf .src.tmp
.PHONY: hisat2-bin
hisat2-bin: $(BIN_PKG_LIST) $(HISAT2_BIN_LIST) $(HISAT2_BIN_LIST_AUX)
chmod a+x scripts/*.sh scripts/*.pl
rm -rf .bin.tmp
mkdir .bin.tmp
mkdir .bin.tmp/hisat2-$(VERSION)
if [ -f hisat2.exe ] ; then \
zip tmp.zip $(BIN_PKG_LIST) $(addsuffix .exe,$(HISAT2_BIN_LIST) $(HISAT2_BIN_LIST_AUX)) ; \
else \
zip tmp.zip $(BIN_PKG_LIST) $(HISAT2_BIN_LIST) $(HISAT2_BIN_LIST_AUX) ; \
fi
mv tmp.zip .bin.tmp/hisat2-$(VERSION)
cd .bin.tmp/hisat2-$(VERSION) ; unzip tmp.zip ; rm -f tmp.zip
cd .bin.tmp ; zip -r hisat2-$(VERSION)-$(BITS).zip hisat2-$(VERSION)
cp .bin.tmp/hisat2-$(VERSION)-$(BITS).zip .
rm -rf .bin.tmp
.PHONY: doc
doc: doc/manual.inc.html MANUAL
doc/manual.inc.html: MANUAL.markdown
pandoc -T "HISAT2 Manual" -o $@ \
--from markdown --to HTML --toc $^
perl -i -ne \
'$$w=0 if m|^</body>|;print if $$w;$$w=1 if m|^<body>|;' $@
MANUAL: MANUAL.markdown
perl doc/strip_markdown.pl < $^ > $@
# Install per filesystem hierarchy standard:
# https://en.wikipedia.org/wiki/Filesystem_Hierarchy_Standard
.PHONY: install
install:
mkdir -p ${DESTDIR}${PREFIX}/bin
${INSTALL} -c -s ${HISAT2_BIN_LIST} ${DESTDIR}${PREFIX}/bin
${INSTALL} -c hisat2 hisat2-build hisat2-inspect \
${DESTDIR}${PREFIX}/bin
mkdir -p ${DESTDIR}${PREFIX}/libexec/hisat2
${INSTALL} -c scripts/*.sh scripts/*.pl *.py \
hisatgenotype_modules/hisat*.py \
hisatgenotype_scripts/*.py hisatgenotype_scripts/*.sh \
${DESTDIR}${PREFIX}/libexec/hisat2
.PHONY: clean
clean:
rm -f $(HISAT2_BIN_LIST) $(HISAT2_BIN_LIST_AUX) \
$(addsuffix .exe,$(HISAT2_BIN_LIST) $(HISAT2_BIN_LIST_AUX)) \
hisat2-src.zip hisat2-bin.zip
rm -f core.* .tmp.head
rm -rf *.dSYM
.PHONY: push-doc
push-doc: doc/manual.inc.html
scp doc/*.*html doc/indexes.txt salz-dmz:/ccb/salz7-data/www/ccb.jhu.edu/html/software/hisat2/

11
biology/hisat2/files/patch-hisat2 Normal file
View file

@ -0,0 +1,11 @@
--- hisat2.orig 2018-11-07 21:43:32 UTC
+++ hisat2
@@ -45,7 +45,7 @@ while (-f $prog && -l $prog){
($vol,$script_path,$prog)
= File::Spec->splitpath($prog);
-my $os_is_nix = ($^O eq "linux") || ($^O eq "darwin");
+my $os_is_nix = ($^O ne "MSWin32") && ($^O ne "MSWin64");
my $align_bin_s = $os_is_nix ? 'hisat2-align-s' : 'hisat2-align-s.exe';
my $build_bin = $os_is_nix ? 'hisat2-build' : 'hisat2-build.exe';
my $align_bin_l = $os_is_nix ? 'hisat2-align-l' : 'hisat2-align-l.exe';

5
biology/hisat2/pkg-descr Normal file
View file

@ -0,0 +1,5 @@
HISAT2 is a fast and sensitive alignment program for mapping next-generation
sequencing reads (both DNA and RNA) to a population of human genomes (as well
as to a single reference genome).
WWW: https://ccb.jhu.edu/software/hisat2/index.shtml

81
biology/hisat2/pkg-plist Normal file
View file

@ -0,0 +1,81 @@
bin/hisat2
bin/hisat2-align-l
bin/hisat2-align-s
bin/hisat2-build
bin/hisat2-build-l
bin/hisat2-build-s
bin/hisat2-inspect
bin/hisat2-inspect-l
bin/hisat2-inspect-s
libexec/hisat2/compare_HLA_Omixon.py
libexec/hisat2/convert_quals.pl
libexec/hisat2/extract_Omixon_HLA.py
libexec/hisat2/extract_exons.py
libexec/hisat2/extract_splice_sites.py
libexec/hisat2/gen_2b_occ_lookup.pl
libexec/hisat2/gen_occ_lookup.pl
libexec/hisat2/gen_solqual_lookup.pl
libexec/hisat2/hisat2_extract_exons.py
libexec/hisat2/hisat2_extract_snps_haplotypes_UCSC.py
libexec/hisat2/hisat2_extract_snps_haplotypes_VCF.py
libexec/hisat2/hisat2_extract_splice_sites.py
libexec/hisat2/hisat2_simulate_reads.py
libexec/hisat2/hisatgenotype.py
libexec/hisat2/hisatgenotype_HLA_genotyping_PGs.py
libexec/hisat2/hisatgenotype_assembly_graph.py
libexec/hisat2/hisatgenotype_build_genome.py
libexec/hisat2/hisatgenotype_convert_codis.py
libexec/hisat2/hisatgenotype_extract_codis_data.py
libexec/hisat2/hisatgenotype_extract_cyp_data.py
libexec/hisat2/hisatgenotype_extract_reads.py
libexec/hisat2/hisatgenotype_extract_vars.py
libexec/hisat2/hisatgenotype_gene_typing.py
libexec/hisat2/hisatgenotype_hla_cyp.py
libexec/hisat2/hisatgenotype_locus.py
libexec/hisat2/hisatgenotype_locus_samples.py
libexec/hisat2/hisatgenotype_typing_common.py
libexec/hisat2/infer_fraglen.pl
libexec/hisat2/make_a_thaliana_tair.sh
libexec/hisat2/make_b_taurus_UMD3.sh
libexec/hisat2/make_bdgp6.sh
libexec/hisat2/make_bdgp6_tran.sh
libexec/hisat2/make_canFam2.sh
libexec/hisat2/make_ce10.sh
libexec/hisat2/make_dm6.sh
libexec/hisat2/make_e_coli.sh
libexec/hisat2/make_grch37.sh
libexec/hisat2/make_grch37_snp.sh
libexec/hisat2/make_grch37_snp_tran.sh
libexec/hisat2/make_grch37_snp_tran_ercc.sh
libexec/hisat2/make_grch37_tran.sh
libexec/hisat2/make_grch38.sh
libexec/hisat2/make_grch38_snp.sh
libexec/hisat2/make_grch38_snp_tran.sh
libexec/hisat2/make_grch38_snp_tran_ercc.sh
libexec/hisat2/make_grch38_tran.sh
libexec/hisat2/make_grcm38.sh
libexec/hisat2/make_grcm38_snp.sh
libexec/hisat2/make_grcm38_snp_tran.sh
libexec/hisat2/make_grcm38_tran.sh
libexec/hisat2/make_hg19.sh
libexec/hisat2/make_hg38.sh
libexec/hisat2/make_hg38_allsnp.sh
libexec/hisat2/make_hg38_snp.sh
libexec/hisat2/make_hg38_snp_tran.sh
libexec/hisat2/make_mm10.sh
libexec/hisat2/make_mm9.sh
libexec/hisat2/make_r64.sh
libexec/hisat2/make_r64_tran.sh
libexec/hisat2/make_rn4.sh
libexec/hisat2/make_rn6.sh
libexec/hisat2/make_rnor6.sh
libexec/hisat2/make_rnor6_tran.sh
libexec/hisat2/make_sc3.sh
libexec/hisat2/make_wbcel235.sh
libexec/hisat2/make_wbcel235_tran.sh
libexec/hisat2/make_zm3_snp_tran_ercc.sh
libexec/hisat2/run_extract_CP.sh
libexec/hisat2/run_extract_ILMN.sh
libexec/hisat2/run_genotype_build.sh
libexec/hisat2/run_hisat2_build.sh
libexec/hisat2/run_type_CP.sh

3
biology/py-orange3-single-cell/Makefile
View file

@ -22,7 +22,8 @@ RUN_DEPENDS= orange3>0:misc/orange3 \
${PYTHON_PKGNAMEPREFIX}scikit-learn>0:science/py-scikit-learn@${PY_FLAVOR} \
${PYNUMPY}
USES= python:3.4+
# Supports 3.4+ but loompy 3.6+ only.
USES= python:3.6+
USE_GITHUB= yes
GH_ACCOUNT= biolab
USE_PYTHON= distutils autoplist

6
databases/akonadi/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225599
SHA256 (KDE/applications/18.12.0/akonadi-18.12.0.tar.xz) = 0860b4a3e2a091658b93a032cbf78d677dbb3acfd305469009205f365dce6eb0
SIZE (KDE/applications/18.12.0/akonadi-18.12.0.tar.xz) = 1552448
TIMESTAMP = 1546985145
SHA256 (KDE/applications/18.12.1/akonadi-18.12.1.tar.xz) = 9d25e849ac81f552fe0d6232f43901803fa25905d023fd1a7f1451c7220f3290
SIZE (KDE/applications/18.12.1/akonadi-18.12.1.tar.xz) = 1552724

7
databases/grass7/Makefile
View file

@ -2,8 +2,7 @@
# $FreeBSD$
PORTNAME= grass
PORTVERSION= 7.4.3
PORTREVISION= 2
PORTVERSION= 7.4.4
CATEGORIES= databases geography
MASTER_SITES= http://grass.osgeo.org/%SUBDIR%/ \
http://grass.cict.fr/%SUBDIR%/ \
@ -38,7 +37,7 @@ LIB_DEPENDS= libgdal.so:graphics/gdal \
libgeos.so:graphics/geos
RUN_DEPENDS= bash:shells/bash
USES= blaslapack compiler:openmp fortran gettext gmake iconv \
USES= blaslapack compiler:openmp fortran gettext gmake gl iconv \
jpeg perl5 pkgconfig python:2.7 readline shebangfix tk
SHEBANG_LANG= nviz
nviz_OLD_CMD= nviz
@ -83,7 +82,7 @@ OPTIONS_MULTI= DB
OPTIONS_MULTI_DB= MYSQL ODBC PGSQL SQLITE
#OPTIONS_SINGLE= BLAS
#OPTIONS_SINGLE_BLAS= ATLAS NETLIB GOTOBLAS OPENBLAS
OPTIONS_DEFAULT= LAS PDAL PGSQL SQLITE NETLIB
OPTIONS_DEFAULT= LAS PDAL PGSQL SQLITE NETLIB MOTIF NETCDF MYSQL ODBC
OPTIONS_SUB= yes
#BLAS_DESC= BLAS/LAPACK support

6
databases/grass7/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1543481027
SHA256 (grass-7.4.3.tar.gz) = 004e65693ee97fd4d5dc7ad244e3286a115dccd88964d04be61c07db6574b399
SIZE (grass-7.4.3.tar.gz) = 58415691
TIMESTAMP = 1546991213
SHA256 (grass-7.4.4.tar.gz) = 96a39e273103f7375a670eba94fa3e5dad2819c5c5664c9aee8f145882a94e8c
SIZE (grass-7.4.4.tar.gz) = 58454921

3
databases/grass7/pkg-plist
View file

@ -1082,6 +1082,7 @@ bin/grass%%VER%%
%%GRASS_INST_DIR%%/docs/html/r.li.shape.html
%%GRASS_INST_DIR%%/docs/html/r.li.simpson.html
%%GRASS_INST_DIR%%/docs/html/r.mapcalc.html
%%GRASS_INST_DIR%%/docs/html/r.mapcalc.simple.html
%%GRASS_INST_DIR%%/docs/html/r.mask.html
%%GRASS_INST_DIR%%/docs/html/r.mfilter.html
%%GRASS_INST_DIR%%/docs/html/r.mode.html
@ -1985,6 +1986,7 @@ bin/grass%%VER%%
%%GRASS_INST_DIR%%/docs/man/man1/r.li.shape.1.gz
%%GRASS_INST_DIR%%/docs/man/man1/r.li.simpson.1.gz
%%GRASS_INST_DIR%%/docs/man/man1/r.mapcalc.1.gz
%%GRASS_INST_DIR%%/docs/man/man1/r.mapcalc.simple.1.gz
%%GRASS_INST_DIR%%/docs/man/man1/r.mask.1.gz
%%GRASS_INST_DIR%%/docs/man/man1/r.mfilter.1.gz
%%GRASS_INST_DIR%%/docs/man/man1/r.mode.1.gz
@ -4093,6 +4095,7 @@ bin/grass%%VER%%
%%GRASS_INST_DIR%%/scripts/r.in.aster
%%GRASS_INST_DIR%%/scripts/r.in.srtm
%%GRASS_INST_DIR%%/scripts/r.in.wms
%%GRASS_INST_DIR%%/scripts/r.mapcalc.simple
%%GRASS_INST_DIR%%/scripts/r.mask
%%GRASS_INST_DIR%%/scripts/r.out.xyz
%%GRASS_INST_DIR%%/scripts/r.pack

1
deskutils/Makefile
View file

@ -205,6 +205,7 @@
SUBDIR += py-pystash
SUBDIR += py-send2trash
SUBDIR += py-taskw
SUBDIR += py-todoman
SUBDIR += py-vdirsyncer
SUBDIR += py-vobject
SUBDIR += pybookreader

6
deskutils/akonadi-calendar-tools/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225578
SHA256 (KDE/applications/18.12.0/akonadi-calendar-tools-18.12.0.tar.xz) = 17aa8c1b6629663e65266fe059dd3a010f3201c45971c01259910def287a5670
SIZE (KDE/applications/18.12.0/akonadi-calendar-tools-18.12.0.tar.xz) = 225048
TIMESTAMP = 1546985125
SHA256 (KDE/applications/18.12.1/akonadi-calendar-tools-18.12.1.tar.xz) = f4a9d950173cdc2cd8978cd54394e93ad445d1d1274fb29b68237e0dd494a428
SIZE (KDE/applications/18.12.1/akonadi-calendar-tools-18.12.1.tar.xz) = 224972

6
deskutils/akonadi-import-wizard/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225580
SHA256 (KDE/applications/18.12.0/akonadi-import-wizard-18.12.0.tar.xz) = cd51da5ac6607cd08d8bb5b96e14c052ba10acfdf9f28530f918a7b5cd3f87e8
SIZE (KDE/applications/18.12.0/akonadi-import-wizard-18.12.0.tar.xz) = 439196
TIMESTAMP = 1546985126
SHA256 (KDE/applications/18.12.1/akonadi-import-wizard-18.12.1.tar.xz) = b2dc7882d394610ce42a17290d41f0ef4dae4de4bdd82e6f0c11d1b0afb62527
SIZE (KDE/applications/18.12.1/akonadi-import-wizard-18.12.1.tar.xz) = 438996

6
deskutils/akonadiconsole/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225581
SHA256 (KDE/applications/18.12.0/akonadiconsole-18.12.0.tar.xz) = 65c53c7b938dca80919b97b3329d3764a722e7f3e8f3c6378f8505155e42e8e1
SIZE (KDE/applications/18.12.0/akonadiconsole-18.12.0.tar.xz) = 193828
TIMESTAMP = 1546985127
SHA256 (KDE/applications/18.12.1/akonadiconsole-18.12.1.tar.xz) = 932360ab89aec5006ba40cd44244dd9ca6b1a5ad6ca0e89699674c66ccbcb01a
SIZE (KDE/applications/18.12.1/akonadiconsole-18.12.1.tar.xz) = 193828

6
deskutils/akregator/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225580
SHA256 (KDE/applications/18.12.0/akregator-18.12.0.tar.xz) = 0dfa2a20c6a6118cfbcec409315b3fe5d8d08ee509f5204e0af6bd7dd945260d
SIZE (KDE/applications/18.12.0/akregator-18.12.0.tar.xz) = 2189036
TIMESTAMP = 1546985127
SHA256 (KDE/applications/18.12.1/akregator-18.12.1.tar.xz) = 299393c71ece1e774502c496d615d5e55535b12a81ceb18eacabdde2de364c7e
SIZE (KDE/applications/18.12.1/akregator-18.12.1.tar.xz) = 2189848

2
deskutils/egroupware/Makefile
View file

@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= eGroupware
PORTVERSION= 17.1.20181205
PORTVERSION= 17.1.20190111
CATEGORIES= deskutils
MASTER_SITES= https://github.com/${GH_ACCOUNT}/${PORTNAME:tl}/releases/download/${PORTVERSION}/
DISTNAME= ${PORTNAME:tl}-epl-${PORTVERSION}

6
deskutils/egroupware/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544823626
SHA256 (egroupware-epl-17.1.20181205.tar.bz2) = 7b446bd7d772e3906dbb4449d55948775ab32333afd8bf44867d1ecec2838256
SIZE (egroupware-epl-17.1.20181205.tar.bz2) = 25979496
TIMESTAMP = 1547248272
SHA256 (egroupware-epl-17.1.20190111.tar.bz2) = bb42bbe68e1799876ffef92f0d203a607441ba641cfb9358d1486ab4c295ef84
SIZE (egroupware-epl-17.1.20190111.tar.bz2) = 25986152

6
deskutils/grantlee-editor/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225580
SHA256 (KDE/applications/18.12.0/grantlee-editor-18.12.0.tar.xz) = 365e25e91c4ef6b77c9f73d962f26568966827d11f08632dc3f32138ad66b040
SIZE (KDE/applications/18.12.0/grantlee-editor-18.12.0.tar.xz) = 110700
TIMESTAMP = 1546985127
SHA256 (KDE/applications/18.12.1/grantlee-editor-18.12.1.tar.xz) = 442acac2eec2d92d2ffeac8ce7dc9491561a8a054b5acf8a929b359273e40565
SIZE (KDE/applications/18.12.1/grantlee-editor-18.12.1.tar.xz) = 110696

6
deskutils/grantleetheme/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225578
SHA256 (KDE/applications/18.12.0/grantleetheme-18.12.0.tar.xz) = fdffe9bbfef0e0f25be1dd3a63073834b58eb598fd156a11239d6f1f3718b8cc
SIZE (KDE/applications/18.12.0/grantleetheme-18.12.0.tar.xz) = 51580
TIMESTAMP = 1546985125
SHA256 (KDE/applications/18.12.1/grantleetheme-18.12.1.tar.xz) = 8c3a62510efcc054f50b0800be378bb5d20eb3f889bbe9ad81d6dfbfd41196b0
SIZE (KDE/applications/18.12.1/grantleetheme-18.12.1.tar.xz) = 51524

6
deskutils/kaddressbook/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225579
SHA256 (KDE/applications/18.12.0/kaddressbook-18.12.0.tar.xz) = f2568b8a5ae47502af82583fe49d934655f751165289026308d528ae8de5d535
SIZE (KDE/applications/18.12.0/kaddressbook-18.12.0.tar.xz) = 471032
TIMESTAMP = 1546985126
SHA256 (KDE/applications/18.12.1/kaddressbook-18.12.1.tar.xz) = 53197384850ac7022d7c3de3bec504d92668747ef0cdef7b52564581995c8a58
SIZE (KDE/applications/18.12.1/kaddressbook-18.12.1.tar.xz) = 471084

6
deskutils/kalarm/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225576
SHA256 (KDE/applications/18.12.0/kalarm-18.12.0.tar.xz) = 228e40edf6cdeacb04113b7dde32838b7d236c4bb788d95c1e5f83421035b3b2
SIZE (KDE/applications/18.12.0/kalarm-18.12.0.tar.xz) = 1812392
TIMESTAMP = 1546985124
SHA256 (KDE/applications/18.12.1/kalarm-18.12.1.tar.xz) = 34d2f00f8aa8f7e7b0de5fea0d8c4b0bb5b6f3bc09c499189b348ba6c07059fc
SIZE (KDE/applications/18.12.1/kalarm-18.12.1.tar.xz) = 1811976

6
deskutils/kcharselect/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225581
SHA256 (KDE/applications/18.12.0/kcharselect-18.12.0.tar.xz) = 1cbfd369085a57659716a050d8a145f664b216720f6936f4a10fcac2a8c79e68
SIZE (KDE/applications/18.12.0/kcharselect-18.12.0.tar.xz) = 355688
TIMESTAMP = 1546985128
SHA256 (KDE/applications/18.12.1/kcharselect-18.12.1.tar.xz) = a64647ede6c0a8e4e75a11891f290d33a5ef4c670686f3497ea9d9a0f7b98adc
SIZE (KDE/applications/18.12.1/kcharselect-18.12.1.tar.xz) = 333572

2
deskutils/kdepim-addons/Makefile
View file

@ -9,6 +9,8 @@ COMMENT= KDE PIM addons
LICENSE= LGPL21
BUILD_DEPENDS= markdown:textproc/discount
RUN_DEPENDS= markdown:textproc/discount
LIB_DEPENDS= libassuan.so:security/libassuan \
libgpg-error.so:security/libgpg-error \
libgpgme.so:security/gpgme \

6
deskutils/kdepim-addons/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225575
SHA256 (KDE/applications/18.12.0/kdepim-addons-18.12.0.tar.xz) = 7766eb2af244bd45140a9d27b13fbaadbc16af0f52f481aa8e1d00cb0ad17e35
SIZE (KDE/applications/18.12.0/kdepim-addons-18.12.0.tar.xz) = 2038112
TIMESTAMP = 1546985123
SHA256 (KDE/applications/18.12.1/kdepim-addons-18.12.1.tar.xz) = 575308fe132500a2757ba87cfb63ef5e07db4fbe5913a37f5682ee341ecee6bf
SIZE (KDE/applications/18.12.1/kdepim-addons-18.12.1.tar.xz) = 2039288

25
deskutils/kdepim-addons/pkg-plist
View file

@ -1,6 +1,3 @@
bin/akonadimailreader
bin/coisceim
bin/etm_usage
bin/kmail_antivir.sh
bin/kmail_clamav.sh
bin/kmail_fprot.sh
@ -12,15 +9,12 @@ etc/xdg/kmail.antivirusrc
lib/contacteditor/editorpageplugins/cryptopageplugin.so
lib/libadblocklibprivate.so.5
lib/libadblocklibprivate.so.%%KDE_APPLICATIONS_SHLIB_VER%%
lib/libcoisceim_widget.so.5
lib/libcoisceim_widget.so.%%KDE_APPLICATIONS_SHLIB_VER%%
lib/libkaddressbookimportexportlibprivate.so.5
lib/libkaddressbookimportexportlibprivate.so.%%KDE_APPLICATIONS_SHLIB_VER%%
lib/libkaddressbookmergelibprivate.so.5
lib/libkaddressbookmergelibprivate.so.%%KDE_APPLICATIONS_SHLIB_VER%%
lib/libshorturlpluginprivate.so.5
lib/libshorturlpluginprivate.so.%%KDE_APPLICATIONS_SHLIB_VER%%
%%QT_PLUGINDIR%%/coisceimpart.so
%%QT_PLUGINDIR%%/contacteditor/addresslocationeditorplugin.so
%%QT_PLUGINDIR%%/importwizard/evolutionv1importerplugin.so
%%QT_PLUGINDIR%%/importwizard/evolutionv2importerplugin.so
@ -50,6 +44,7 @@ lib/libshorturlpluginprivate.so.%%KDE_APPLICATIONS_SHLIB_VER%%
%%QT_PLUGINDIR%%/kmail/kmail_insertshorturleditorplugin.so
%%QT_PLUGINDIR%%/kmail/kmail_insertspecialcharactereditorplugin.so
%%QT_PLUGINDIR%%/kmail/kmail_logactivitiesplugin.so
%%QT_PLUGINDIR%%/kmail/kmail_markdownplugin.so
%%QT_PLUGINDIR%%/kmail/kmail_nonbreakingspaceeditorplugin.so
%%QT_PLUGINDIR%%/kmail/kmail_sharetexteditorplugin.so
%%QT_PLUGINDIR%%/kmail/kmail_zoomtexteditorplugin.so
@ -90,18 +85,14 @@ lib/libshorturlpluginprivate.so.%%KDE_APPLICATIONS_SHLIB_VER%%
%%QT_PLUGINDIR%%/webengineviewer/webengineviewer_donottrackplugin.so
%%QT_QMLDIR%%/org/kde/plasma/PimCalendars/libpimcalendarsplugin.so
%%QT_QMLDIR%%/org/kde/plasma/PimCalendars/qmldir
share/applications/org.kde.akonadimailreader.desktop
share/config.kcfg/mailreader.kcfg
share/contacteditor/grantleetheme/default/addresseslocation.css
share/contacteditor/grantleetheme/default/addresseslocation.html
share/kconf_update/webengineurlinterceptoradblock.upd
share/kmail2/pics/kmwizard.png
share/kmail2/pics/kmwizard.svg
share/kservices5/coisceimpart.desktop
share/kservices5/korganizer/datenums.desktop
share/kservices5/korganizer/picoftheday.desktop
share/kservices5/korganizer/thisdayinhistory.desktop
share/kxmlgui5/akonadimailreader/akonadimailreaderui.rc
share/locale/ar/LC_MESSAGES/cryptopageplugin.mo
share/locale/ar/LC_MESSAGES/customtoolsplugin.mo
share/locale/ar/LC_MESSAGES/importwizard_plugins.mo
@ -894,12 +885,19 @@ share/locale/zh_CN/LC_MESSAGES/sieveeditor_plugins.mo
share/locale/zh_CN/LC_MESSAGES/webengineurlinterceptor.mo
share/locale/zh_TW/LC_MESSAGES/cryptopageplugin.mo
share/locale/zh_TW/LC_MESSAGES/customtoolsplugin.mo
share/locale/zh_TW/LC_MESSAGES/importwizard_plugins.mo
share/locale/zh_TW/LC_MESSAGES/kaddressbook_contacteditor.mo
share/locale/zh_TW/LC_MESSAGES/kaddressbook_importexportplugins.mo
share/locale/zh_TW/LC_MESSAGES/kaddressbook_plugins.mo
share/locale/zh_TW/LC_MESSAGES/kmail_editor_plugins.mo
share/locale/zh_TW/LC_MESSAGES/kmail_editorsendcheck_plugins.mo
share/locale/zh_TW/LC_MESSAGES/kmail_plugins.mo
share/locale/zh_TW/LC_MESSAGES/kmail_editorconvertertext_plugins.mo
share/locale/zh_TW/LC_MESSAGES/kmail_editorinit_plugins.mo
share/locale/zh_TW/LC_MESSAGES/kmailtransport_plugins.mo
share/locale/zh_TW/LC_MESSAGES/korganizer_plugins.mo
share/locale/zh_TW/LC_MESSAGES/messageviewer_bodypartformatter_pkpass.mo
share/locale/zh_TW/LC_MESSAGES/messageviewer_semantic_plugin.mo
share/locale/zh_TW/LC_MESSAGES/mailreader.mo
share/locale/zh_TW/LC_MESSAGES/messageviewer_application_gnupgwks_plugin.mo
share/locale/zh_TW/LC_MESSAGES/messageviewer_application_mstnef_plugin.mo
@ -907,14 +905,9 @@ share/locale/zh_TW/LC_MESSAGES/messageviewer_text_calendar_plugin.mo
share/locale/zh_TW/LC_MESSAGES/messageviewer_text_vcard_plugin.mo
share/locale/zh_TW/LC_MESSAGES/messageviewerheaderplugins.mo
share/locale/zh_TW/LC_MESSAGES/messageviewerplugins.mo
share/locale/zh_TW/LC_MESSAGES/pimeventsplugin.mo
share/locale/zh_TW/LC_MESSAGES/sieveeditor_plugins.mo
share/locale/zh_TW/LC_MESSAGES/webengineurlinterceptor.mo
share/messageviewer/themes/example/header.desktop
share/messageviewer/themes/example/header.html
share/messageviewer/themes/example/header_row.html
share/messageviewer/themes/example_fancy/header.desktop
share/messageviewer/themes/example_fancy/header.html
share/messageviewerplugins/externalscriptexample.desktop
share/qtcreator/templates/kmaileditorconvertertextplugins/CMakeLists.txt
share/qtcreator/templates/kmaileditorconvertertextplugins/plugin.json.impl
share/qtcreator/templates/kmaileditorconvertertextplugins/plugineditor.cpp

6
deskutils/kdepim-apps-libs/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225578
SHA256 (KDE/applications/18.12.0/kdepim-apps-libs-18.12.0.tar.xz) = fd181d64229efc00633ad686616949670ba71555785314a897619b2580b1c3a3
SIZE (KDE/applications/18.12.0/kdepim-apps-libs-18.12.0.tar.xz) = 84724
TIMESTAMP = 1546985126
SHA256 (KDE/applications/18.12.1/kdepim-apps-libs-18.12.1.tar.xz) = 7160d7cf38b77d07250fc3e94d3b2482f4805c5c808fce0894c69804aa01031b
SIZE (KDE/applications/18.12.1/kdepim-apps-libs-18.12.1.tar.xz) = 84832

1
deskutils/kdepim-apps-libs/pkg-plist
View file

@ -181,4 +181,5 @@ share/locale/zh_CN/LC_MESSAGES/libkaddressbookgrantlee.mo
share/locale/zh_CN/LC_MESSAGES/libkaddressbookimportexport.mo
share/locale/zh_CN/LC_MESSAGES/libsendlater.mo
share/locale/zh_TW/LC_MESSAGES/libkaddressbookgrantlee.mo
share/locale/zh_TW/LC_MESSAGES/libkaddressbookimportexport.mo
share/locale/zh_TW/LC_MESSAGES/libsendlater.mo

6
deskutils/kdepim-runtime/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544478483
SHA256 (KDE/applications/18.12.0/kdepim-runtime-18.12.0.tar.xz) = a1505916e503ac79b52dafc483e8e82f3f4f5abba2f8c89430f1466ed77abc6e
SIZE (KDE/applications/18.12.0/kdepim-runtime-18.12.0.tar.xz) = 1772412
TIMESTAMP = 1546985124
SHA256 (KDE/applications/18.12.1/kdepim-runtime-18.12.1.tar.xz) = 6c5963d47becb0ba39b2ab8a6ec35b41c7a3e7205c8937d8a48773e93fce69ed
SIZE (KDE/applications/18.12.1/kdepim-runtime-18.12.1.tar.xz) = 1772996

3
deskutils/kdepim-runtime/pkg-plist
View file

@ -1743,6 +1743,7 @@ share/locale/zh_CN/LC_MESSAGES/kio_akonadi.mo
share/locale/zh_CN/LC_MESSAGES/kio_pop3.mo
share/locale/zh_CN/LC_MESSAGES/libfolderarchivesettings.mo
share/locale/zh_TW/LC_MESSAGES/accountwizard_contacts.mo
share/locale/zh_TW/LC_MESSAGES/accountwizard_ews.mo
share/locale/zh_TW/LC_MESSAGES/accountwizard_ical.mo
share/locale/zh_TW/LC_MESSAGES/accountwizard_imap.mo
share/locale/zh_TW/LC_MESSAGES/accountwizard_kolab.mo
@ -1755,6 +1756,8 @@ share/locale/zh_TW/LC_MESSAGES/akonadi-filestore.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_birthdays_resource.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_contacts_resource.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_davgroupware_resource.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_facebook_resource.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_ews_resource.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_gmail_resource.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_googlecalendar_resource.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_googlecontacts_resource.mo

6
deskutils/keditbookmarks/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225577
SHA256 (KDE/applications/18.12.0/keditbookmarks-18.12.0.tar.xz) = b526e4cdb88cc896b6e600ac15af16010d0782ea2709dc9f6bd13583ab4a46c5
SIZE (KDE/applications/18.12.0/keditbookmarks-18.12.0.tar.xz) = 184712
TIMESTAMP = 1546985124
SHA256 (KDE/applications/18.12.1/keditbookmarks-18.12.1.tar.xz) = 418eaadd5044cb3c4091bd137bc9c64228eefb28519d779e360d41fbdcabdd3a
SIZE (KDE/applications/18.12.1/keditbookmarks-18.12.1.tar.xz) = 184732

6
deskutils/kfind/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225578
SHA256 (KDE/applications/18.12.0/kfind-18.12.0.tar.xz) = f3bfc2fc34420d282e6e54e92cfc02d10211e674fc0eaafbc2d6277e1172a24e
SIZE (KDE/applications/18.12.0/kfind-18.12.0.tar.xz) = 267448
TIMESTAMP = 1546985125
SHA256 (KDE/applications/18.12.1/kfind-18.12.1.tar.xz) = ab90ee3694cbea7dfa1b770c731606c127de3d8df739474c2cac42e9b53111ee
SIZE (KDE/applications/18.12.1/kfind-18.12.1.tar.xz) = 267472

6
deskutils/kmail-account-wizard/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225577
SHA256 (KDE/applications/18.12.0/kmail-account-wizard-18.12.0.tar.xz) = 4f1258d6d1fb919c350593af6c26f209903549634a298e1a2f1ce3ac56f60313
SIZE (KDE/applications/18.12.0/kmail-account-wizard-18.12.0.tar.xz) = 155964
TIMESTAMP = 1546985124
SHA256 (KDE/applications/18.12.1/kmail-account-wizard-18.12.1.tar.xz) = 438af7737e0e1443acb6f6977bf57797d1047e99268f53cc7e0f8c35e6e3746c
SIZE (KDE/applications/18.12.1/kmail-account-wizard-18.12.1.tar.xz) = 155856

6
deskutils/kmail/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225577
SHA256 (KDE/applications/18.12.0/kmail-18.12.0.tar.xz) = 5d1018d901faa4c72910f1214fb3b3dbe1335f6a4e96b696c75b3179d9a17f47
SIZE (KDE/applications/18.12.0/kmail-18.12.0.tar.xz) = 4723296
TIMESTAMP = 1546985124
SHA256 (KDE/applications/18.12.1/kmail-18.12.1.tar.xz) = 87f75a63a07073361ed0b33b440d390d0e6546b888890e479a608fdb69ce53f1
SIZE (KDE/applications/18.12.1/kmail-18.12.1.tar.xz) = 4723532

1082
deskutils/kmail/files/patch-agents_unifiedmailboxagent_boost__optional.h
View file

File diff suppressed because it is too large Load diff

11
deskutils/kmail/files/patch-agents_unifiedmailboxagent_utils.h
View file

@ -1,11 +0,0 @@
--- agents/unifiedmailboxagent/utils.h.orig 2018-12-29 21:15:58 UTC
+++ agents/unifiedmailboxagent/utils.h
@@ -24,7 +24,7 @@
#include <QHash>
#include <QString>
-#include <experimental/optional>
+#include "boost_optional.h"
namespace stdx {
// Injects content of std::experimental namespace into "exp" namespace.
// C++ is magical.

1
deskutils/kmail/pkg-plist
View file

@ -355,6 +355,7 @@ share/locale/zh_TW/LC_MESSAGES/akonadi_archivemail_agent.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_followupreminder_agent.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_mailfilter_agent.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_sendlater_agent.mo
share/locale/zh_TW/LC_MESSAGES/akonadi_unifiedmailbox_agent.mo
share/locale/zh_TW/LC_MESSAGES/kmail.mo
share/locale/zh_TW/LC_MESSAGES/ktnef.mo
share/metainfo/org.kde.kmail2.appdata.xml

6
deskutils/knotes/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225579
SHA256 (KDE/applications/18.12.0/knotes-18.12.0.tar.xz) = 196f28ee5ece912cda477b802cc63725f391bac995b52446a5afa967cc2c17e4
SIZE (KDE/applications/18.12.0/knotes-18.12.0.tar.xz) = 319620
TIMESTAMP = 1546985126
SHA256 (KDE/applications/18.12.1/knotes-18.12.1.tar.xz) = bf192d7d44ad0a1a63ac5ac5408f6c59c8c5bbfe44ba5edcda9fede4ec07c48a
SIZE (KDE/applications/18.12.1/knotes-18.12.1.tar.xz) = 319668

6
deskutils/kontact/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225576
SHA256 (KDE/applications/18.12.0/kontact-18.12.0.tar.xz) = 8b25cf72071e5293e5deebb0816d4c66be3ff76906957be0ffbb289eb3903045
SIZE (KDE/applications/18.12.0/kontact-18.12.0.tar.xz) = 792068
TIMESTAMP = 1546985123
SHA256 (KDE/applications/18.12.1/kontact-18.12.1.tar.xz) = 4fc12e1fa9e0e86f2ded2101d14d19358639465da2c144839ef3f272e04e162f
SIZE (KDE/applications/18.12.1/kontact-18.12.1.tar.xz) = 792032

6
deskutils/korganizer/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225579
SHA256 (KDE/applications/18.12.0/korganizer-18.12.0.tar.xz) = 0cf10cf20e5c8c17038005d030a8bc29e335cbc8ea2008bc01ab7690a8be685e
SIZE (KDE/applications/18.12.0/korganizer-18.12.0.tar.xz) = 2232952
TIMESTAMP = 1546985126
SHA256 (KDE/applications/18.12.1/korganizer-18.12.1.tar.xz) = 4f7fd1ab1e2de93d9dfeccc530d21674eb82694f1f2587614ffdf50f5f961cbd
SIZE (KDE/applications/18.12.1/korganizer-18.12.1.tar.xz) = 2232976

6
deskutils/kruler/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225581
SHA256 (KDE/applications/18.12.0/kruler-18.12.0.tar.xz) = 0781366f7b55d0c88f57b0638726b98492f6d692f2e0baf6a629e48c6c394857
SIZE (KDE/applications/18.12.0/kruler-18.12.0.tar.xz) = 295872
TIMESTAMP = 1546985127
SHA256 (KDE/applications/18.12.1/kruler-18.12.1.tar.xz) = 26072113f0b302484cb78e98af7fab37d36d1d52de3ba33830a8e767f855ddf1
SIZE (KDE/applications/18.12.1/kruler-18.12.1.tar.xz) = 254564

6
deskutils/libkdepim/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225576
SHA256 (KDE/applications/18.12.0/libkdepim-18.12.0.tar.xz) = 0d969f1c0e2c3fac5d277905f9caa56232d2b579adb5fa3fc039c3d8c67012a1
SIZE (KDE/applications/18.12.0/libkdepim-18.12.0.tar.xz) = 336228
TIMESTAMP = 1546985123
SHA256 (KDE/applications/18.12.1/libkdepim-18.12.1.tar.xz) = d71db3ad43403371e7c180557514f32598e6021eee6ccf9dfa150c7391917fe3
SIZE (KDE/applications/18.12.1/libkdepim-18.12.1.tar.xz) = 336208

6
deskutils/mbox-importer/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225578
SHA256 (KDE/applications/18.12.0/mbox-importer-18.12.0.tar.xz) = 55931099051ed6e7f04d7c7a766c83adbdfceb8c5ec88c4e83db5cf68b7b2e23
SIZE (KDE/applications/18.12.0/mbox-importer-18.12.0.tar.xz) = 33364
TIMESTAMP = 1546985125
SHA256 (KDE/applications/18.12.1/mbox-importer-18.12.1.tar.xz) = 56b8920935ee3b08c5743ef455864b102ea58fe461adb4f5ae796cb38f5c4ac0
SIZE (KDE/applications/18.12.1/mbox-importer-18.12.1.tar.xz) = 33380

6
deskutils/pim-data-exporter/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225580
SHA256 (KDE/applications/18.12.0/pim-data-exporter-18.12.0.tar.xz) = 4c96bd35fad10c03a51e0f3785fffe23fdd05f266cce883ace92672640639d7b
SIZE (KDE/applications/18.12.0/pim-data-exporter-18.12.0.tar.xz) = 270888
TIMESTAMP = 1546985127
SHA256 (KDE/applications/18.12.1/pim-data-exporter-18.12.1.tar.xz) = abfedbb9b1cdf9755320558ba8502ea15c843400f3980df1f95fb5f113253684
SIZE (KDE/applications/18.12.1/pim-data-exporter-18.12.1.tar.xz) = 270928

6
deskutils/pim-sieve-editor/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225577
SHA256 (KDE/applications/18.12.0/pim-sieve-editor-18.12.0.tar.xz) = 85509a35cd726bdcecdd39e37bcb8e8951d59d49eb885255dc01dfe0edca8e90
SIZE (KDE/applications/18.12.0/pim-sieve-editor-18.12.0.tar.xz) = 450536
TIMESTAMP = 1546985125
SHA256 (KDE/applications/18.12.1/pim-sieve-editor-18.12.1.tar.xz) = c7687b2af42e24c4bfabbe9c3ca6b7e0f5d3b1eb3121f5aeba4c7a467ecd1244
SIZE (KDE/applications/18.12.1/pim-sieve-editor-18.12.1.tar.xz) = 450572

44
deskutils/py-todoman/Makefile Normal file
View file

@ -0,0 +1,44 @@
# $FreeBSD$
PORTNAME= todoman
DISTVERSION= 3.5.0
CATEGORIES= deskutils python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
MAINTAINER= andreas@bilke.org
COMMENT= Simple CalDAV-based todo manager
LICENSE= ISCL
LICENSE_FILE= ${WRKSRC}/LICENCE
BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools_scm>1.12.0:devel/py-setuptools_scm@${PY_FLAVOR}
RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}atomicwrites>=0.1.7:devel/py-atomicwrites@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}click>=6.0:devel/py-click@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}click-log>=0.2.1:devel/py-click-log@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}configobj>=5.0.6:devel/py-configobj@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}dateutil>=2.6:devel/py-dateutil@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}humanize>=0.5.1:devel/py-humanize@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}icalendar>=4.0.3:devel/py-icalendar@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}parsedatetime>=2.4:devel/py-parsedatetime@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}tabulate>=0.8.2:devel/py-tabulate@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}urwid>=2.0.1:devel/py-urwid@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}vdirsyncer>=0:deskutils/py-vdirsyncer@${PY_FLAVOR} \
${PYTHON_PKGNAMEPREFIX}xdg>=0.25:devel/py-xdg@${PY_FLAVOR}
USES= python:3.5+
USE_PYTHON= autoplist distutils
NO_ARCH= yes
PLIST_FILES= share/zsh/site-functions/_todoman \
${EXAMPLESDIR}/todoman.conf.sample
post-install:
@${MKDIR} ${STAGEDIR}${PREFIX}/share/zsh/site-functions
${INSTALL_DATA} ${WRKSRC}/contrib/completion/zsh/_todo \
${STAGEDIR}${PREFIX}/share/zsh/site-functions/_todoman
${MKDIR} ${STAGEDIR}${EXAMPLESDIR}
(cd ${WRKSRC}/ && ${COPYTREE_SHARE} todoman.conf.sample ${STAGEDIR}${EXAMPLESDIR})
.include <bsd.port.mk>

3
deskutils/py-todoman/distinfo Normal file
View file

@ -0,0 +1,3 @@
TIMESTAMP = 1542740061
SHA256 (todoman-3.5.0.tar.gz) = 89032887051b164527b90cfb947eb5162dd8b8bb64d9abf1e906b8c86f933814
SIZE (todoman-3.5.0.tar.gz) = 61484

5
deskutils/py-todoman/pkg-descr Normal file
View file

@ -0,0 +1,5 @@
Todoman is a simple, standards-based, cli todo (aka: task) manager.
Todos are stored into icalendar files, which means you can sync them
via CalDAV using, for example, vdirsyncer.
WWW: https://github.com/pimutils/todoman/

3
devel/Makefile
View file

@ -1270,6 +1270,7 @@
SUBDIR += jech-dht
SUBDIR += jenkins
SUBDIR += jenkins-lts
SUBDIR += jetbrains-phpstorm
SUBDIR += jfrog-cli
SUBDIR += jiic
SUBDIR += jiri
@ -4608,6 +4609,7 @@
SUBDIR += py-isort
SUBDIR += py-iterpipes
SUBDIR += py-itypes
SUBDIR += py-jaraco
SUBDIR += py-jaraco.classes
SUBDIR += py-jaraco.functools
SUBDIR += py-jaraco.itertools
@ -5827,6 +5829,7 @@
SUBDIR += rubygem-parser
SUBDIR += rubygem-pastel
SUBDIR += rubygem-patch_finder
SUBDIR += rubygem-pathspec
SUBDIR += rubygem-pathutil
SUBDIR += rubygem-peek
SUBDIR += rubygem-peek-rails50

4
devel/bsdowl/Makefile
View file

@ -3,7 +3,7 @@
PORTNAME= bsdowl
PORTVERSION= 2.2.1
PORTREVISION= 2
PORTREVISION= 3
CATEGORIES= devel
MASTER_SITES= https://github.com/michipili/bsdowl/releases/download/v${PORTVERSION}/
@ -16,7 +16,7 @@ LICENSE_FILE= ${WRKSRC}/COPYING
LICENSE_PERMS= dist-mirror dist-sell pkg-mirror pkg-sell auto-accept
BUILD_DEPENDS= gm:graphics/GraphicsMagick
BUILD_DEPENDS= gm:graphics/GraphicsMagick
RUN_DEPENDS= gm:graphics/GraphicsMagick
USES= tar:xz uidfix

6
devel/cervisia/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225564
SHA256 (KDE/applications/18.12.0/cervisia-18.12.0.tar.xz) = 7d64b0a35ada0c06db943efa7d4396ebc570fed2ec5fb359f2ab40ba9dfca5e4
SIZE (KDE/applications/18.12.0/cervisia-18.12.0.tar.xz) = 1905940
TIMESTAMP = 1546985113
SHA256 (KDE/applications/18.12.1/cervisia-18.12.1.tar.xz) = a76358db8aab31805be9a994da3c67707c4784d15ba08b879a6dac09330b6a0a
SIZE (KDE/applications/18.12.1/cervisia-18.12.1.tar.xz) = 1905856

6
devel/dolphin-plugins/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1544225564
SHA256 (KDE/applications/18.12.0/dolphin-plugins-18.12.0.tar.xz) = 3cca26bc0064b4babb4b8f524b521ba1fa257f42c8cb0f06188072053bd5f31e
SIZE (KDE/applications/18.12.0/dolphin-plugins-18.12.0.tar.xz) = 191844
TIMESTAMP = 1546985113
SHA256 (KDE/applications/18.12.1/dolphin-plugins-18.12.1.tar.xz) = 0876b9c5226c3673b36c3ba45c89da74c7b5e093bd8ff300e4e28a7142924c48
SIZE (KDE/applications/18.12.1/dolphin-plugins-18.12.1.tar.xz) = 191968

2
devel/elixir-excoveralls/Makefile
View file

@ -1,7 +1,7 @@
# $FreeBSD$
PORTNAME= excoveralls
PORTVERSION= 0.10.3
PORTVERSION= 0.10.4
DISTVERSIONPREFIX= v
CATEGORIES= devel
PKGNAMEPREFIX= elixir-

6
devel/elixir-excoveralls/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1542617372
SHA256 (parroty-excoveralls-v0.10.3_GH0.tar.gz) = 6468b8df30e24cbca72a22aa2623ad69c07994e5d7237ecad1a3176de43891a9
SIZE (parroty-excoveralls-v0.10.3_GH0.tar.gz) = 199854
TIMESTAMP = 1547210990
SHA256 (parroty-excoveralls-v0.10.4_GH0.tar.gz) = e9366f05d3e74cfb7bc0d97fd5e1d7fe3f44f4519bac452b93d8436d5c1ebd22
SIZE (parroty-excoveralls-v0.10.4_GH0.tar.gz) = 199938

4
devel/ikos/Makefile
View file

@ -2,8 +2,8 @@
PORTNAME= ikos
DISTVERSIONPREFIX= v
DISTVERSION= 2.1-49
DISTVERSIONSUFFIX= -g704adae
DISTVERSION= 2.1-52
DISTVERSIONSUFFIX= -ge5db052
CATEGORIES= devel
MAINTAINER= yuri@FreeBSD.org

6
devel/ikos/distinfo
View file

@ -1,3 +1,3 @@
TIMESTAMP = 1546933907
SHA256 (NASA-SW-VnV-ikos-v2.1-49-g704adae_GH0.tar.gz) = 160e0124058de648f1cf2275faaa2e0fa33e9940488f9e39688b5c7123c86cc7
SIZE (NASA-SW-VnV-ikos-v2.1-49-g704adae_GH0.tar.gz) = 1254355
TIMESTAMP = 1547093519
SHA256 (NASA-SW-VnV-ikos-v2.1-52-ge5db052_GH0.tar.gz) = 82bd6636df96a0399f7025e1e97a7cc020262e53f784a4b50ceb52a6ded1b717
SIZE (NASA-SW-VnV-ikos-v2.1-52-ge5db052_GH0.tar.gz) = 1253559

1
devel/ikos/pkg-plist
View file

@ -18,7 +18,6 @@ include/ikos/ar/pass/name_values.hpp
include/ikos/ar/pass/pass.hpp
include/ikos/ar/pass/simplify_cfg.hpp
include/ikos/ar/pass/simplify_upcast_comparison.hpp
include/ikos/ar/pass/unify_exit_nodes.hpp
include/ikos/ar/semantic.hpp
include/ikos/ar/semantic/bundle.hpp
include/ikos/ar/semantic/code.hpp

59
devel/jetbrains-phpstorm/Makefile Normal file
View file

@ -0,0 +1,59 @@
# Created by: Pedro Giffuni <pfg@FreeBSD.org>
# $FreeBSD$
PORTNAME= phpstorm
PORTVERSION= 2018.3.2
CATEGORIES= devel java
MASTER_SITES= https://download.jetbrains.com/webide/ \
http://download.jetbrains.com/webide/
PKGNAMEPREFIX= jetbrains-
DISTNAME= PhpStorm-${PORTVERSION}
MAINTAINER= pfg@FreeBSD.org
COMMENT= JetBrains PhpStorm IDE
LICENSE= IntelliJ-PhpStorm
LICENSE_NAME= Subscription license agreement for business and organizations
LICENSE_TEXT= See: https://www.jetbrains.com/store/license.html
LICENSE_PERMS= dist-mirror pkg-mirror auto-accept
RUN_DEPENDS= intellij-fsnotifier>0:java/intellij-fsnotifier \
intellij-pty4j>0:java/intellij-pty4j
USES= python:run shebangfix
USE_JAVA= yes
JAVA_VERSION= 1.8+
SHEBANG_FILES= bin/printenv.py bin/restart.py
NO_ARCH= yes
NO_BUILD= yes
WRKSRC= ${WRKDIR}/PhpStorm-183.4886.46
SUB_FILES= phpstorm phpstorm.desktop pkg-message
SUB_LIST= DATADIR=${DATADIR}
do-install:
${MKDIR} ${STAGEDIR}${DATADIR}
@${TAR} -czf - -C ${WRKSRC} . | ${TAR} xzf - -C ${STAGEDIR}${DATADIR}
# Linux/Windows/OS X only so remove them
@${RM} ${STAGEDIR}${DATADIR}/bin/fsnotifier \
${STAGEDIR}${DATADIR}/bin/fsnotifier-arm \
${STAGEDIR}${DATADIR}/bin/fsnotifier64 \
${STAGEDIR}${DATADIR}/bin/lib*.so
@${RM} ${STAGEDIR}${DATADIR}/plugins/performanceTesting/lib/lib*.so
# Remove the bundled native Pty4J support libraries, they are replaced
# by java/intellij-pty4j
# Remove bundled linux OpenJDK and DroidSerif fonts
@${RM} -r ${STAGEDIR}${DATADIR}/jre64
${INSTALL_SCRIPT} ${WRKDIR}/phpstorm ${STAGEDIR}${PREFIX}/bin/phpstorm
${INSTALL_MAN} ${FILESDIR}/phpstorm.1 ${STAGEDIR}${PREFIX}/man/man1
${INSTALL_DATA} ${WRKDIR}/phpstorm.desktop ${STAGEDIR}${PREFIX}/share/applications/
cd ${WRKSRC}/lib && ${JAVA_HOME}/bin/jar xf icons.jar
${INSTALL_DATA} ${WRKSRC}/lib/icon.png ${STAGEDIR}${DATADIR}/phpstorm.png
# Use fsnotifier replacement provided by java/intellij-fsnotifier
${ECHO} "idea.filewatcher.executable.path=${DATADIR}/bin/fsnotifier" >> ${STAGEDIR}${DATADIR}/bin/idea.properties
.include <bsd.port.mk>

3
devel/jetbrains-phpstorm/distinfo Normal file
View file

@ -0,0 +1,3 @@
TIMESTAMP = 1545924844
SHA256 (PhpStorm-2018.3.2.tar.gz) = 9e163cb19819b0d70d5b07168cfee1ca590c4d2ac7bdfa2e2ed9de09e8639823
SIZE (PhpStorm-2018.3.2.tar.gz) = 311392213

16
devel/jetbrains-phpstorm/files/phpstorm.1 Normal file
View file

@ -0,0 +1,16 @@
.\" $OpenBSD: mdoc.template,v 1.10 2007/05/31 22:10:19 jmc Exp $
.Dd $Mdocdate: April 9 2010 $
.Dt IDEA 1
.Os
.Sh NAME
.Nm idea
.Nd launch JetBrains PhpStorm Integrated Development Environment
.Sh SYNOPSIS
.Nm
.Op jvm-args
.Sh DESCRIPTION
.Nm
starts up the JetBrains PhpStorm Integrated Development Environment.
.Sh SEE ALSO
The web site
https://www.jetbrains.com/phpstorm .

12
devel/jetbrains-phpstorm/files/phpstorm.desktop.in Normal file
View file

@ -0,0 +1,12 @@
[Desktop Entry]
Version=1.0
Encoding=UTF-8
Type=Application
Name=PhpStorm
GenericName=PhpStorm
Comment=PhpStorm Integrated Development Environment
Icon=%%DATADIR%%/bin/phpstorm.png
Exec=%%DATADIR%%/bin/phpstorm.sh
Terminal=false
StartupNotify=true
Categories=Application;Development;

3
devel/jetbrains-phpstorm/files/phpstorm.in Normal file
View file

@ -0,0 +1,3 @@
#!/bin/sh
exec "%%DATADIR%%/bin/phpstorm.sh" "$@"

6
devel/jetbrains-phpstorm/files/pkg-message.in Normal file
View file

@ -0,0 +1,6 @@
There is native (faster) file watching support backed by kqueue which is
enabled by default. If you encounter problems problems with watching large
trees, you disable it by appending the following property into
%%DATADIR%%/bin/idea.properties:
idea.filewatcher.disabled=true

9
devel/jetbrains-phpstorm/pkg-descr Normal file
View file

@ -0,0 +1,9 @@
PhpStorm is The Lightning-Smart PHP IDE
PhpStorm is perfect for working with Symfony, Drupal, WordPress, Zend Framework,
Laravel, Magento, Joomla!, CakePHP, Yii, and other frameworks.
While this is trial software, there are commercial and academic licenses
available.
WWW: https://www.jetbrains.com/phpstorm

610
devel/jetbrains-phpstorm/pkg-plist Normal file
View file

@ -0,0 +1,610 @@
bin/phpstorm
man/man1/phpstorm.1.gz
share/applications/phpstorm.desktop
%%DATADIR%%/Install-Linux-tar.txt
%%DATADIR%%/bin/format.sh
%%DATADIR%%/bin/idea.properties
%%DATADIR%%/bin/inspect.sh
%%DATADIR%%/bin/log.xml
%%DATADIR%%/bin/phpstorm.png
%%DATADIR%%/bin/phpstorm.sh
%%DATADIR%%/bin/phpstorm.svg
%%DATADIR%%/bin/phpstorm.vmoptions
%%DATADIR%%/bin/phpstorm64.vmoptions
%%DATADIR%%/bin/printenv.py
%%DATADIR%%/bin/restart.py
%%DATADIR%%/build.txt
%%DATADIR%%/help/ReferenceCard.pdf
%%DATADIR%%/help/ReferenceCardForMac.pdf
%%DATADIR%%/lib/annotations-16.0.2.jar
%%DATADIR%%/lib/annotations-java5.jar
%%DATADIR%%/lib/asm-all-7.0.jar
%%DATADIR%%/lib/automaton-1.12-1.jar
%%DATADIR%%/lib/batik-all-1.10.jar
%%DATADIR%%/lib/bcprov-jdk15on-1.60.jar
%%DATADIR%%/lib/bootstrap.jar
%%DATADIR%%/lib/cglib-nodep-3.2.4.jar
%%DATADIR%%/lib/cli-parser-1.1.2.jar
%%DATADIR%%/lib/cloud-config-client.jar
%%DATADIR%%/lib/common-image-3.3.2.jar
%%DATADIR%%/lib/common-io-3.3.2.jar
%%DATADIR%%/lib/common-lang-3.3.2.jar
%%DATADIR%%/lib/commons-codec-1.10.jar
%%DATADIR%%/lib/commons-collections-3.2.2.jar
%%DATADIR%%/lib/commons-compress-1.17.jar
%%DATADIR%%/lib/commons-httpclient-3.1-patched.jar
%%DATADIR%%/lib/commons-imaging-1.0-RC-1.jar
%%DATADIR%%/lib/commons-lang-2.4.jar
%%DATADIR%%/lib/commons-logging-1.2.jar
%%DATADIR%%/lib/commons-net-3.6.jar
%%DATADIR%%/lib/delight-nashorn-sandbox-0.1.16.jar
%%DATADIR%%/lib/eddsa-0.2.0.jar
%%DATADIR%%/lib/error_prone_annotations-2.3.1.jar
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