opnsense-ports/biology
Franco Fichtner 643fd91f32 */*: sync with upstream
Taken from: HardenedBSD
2017-10-25 21:27:38 +02:00
..
ariadne */*: sync with upstream 2017-10-13 18:11:37 +02:00
artemis */*: sync with upstream 2017-10-13 18:11:37 +02:00
avida */*: sync with upstream 2017-05-14 12:46:30 +02:00
babel */*: sync with upstream 2015-09-10 05:23:56 +02:00
bcftools */*: sync with upstream 2017-10-25 21:27:38 +02:00
bedtools */*: sync with upstream 2017-05-27 17:46:26 +02:00
biococoa */*: sync with upstream 2017-10-13 18:11:37 +02:00
blat */*: sync with upstream 2017-06-10 20:33:53 +02:00
bowtie */*: sync with upstream 2017-09-10 16:31:24 +02:00
bowtie2 */*: sync with upstream 2017-09-17 16:20:00 +02:00
bwa */*: sync with upstream 2017-05-27 17:46:26 +02:00
cd-hit */*: sync with upstream 2017-09-10 16:31:24 +02:00
cdbfasta */*: sync with upstream 2017-01-21 18:28:10 +01:00
chemeq */*: sync with upstream 2016-12-18 10:25:29 +01:00
clustalw */*: sync with upstream 2016-05-26 07:35:16 +02:00
consed */*: sync with upstream 2016-09-16 14:21:20 +02:00
crux */*: sync with upstream 2017-10-13 18:11:37 +02:00
diamond */*: sync with upstream 2017-09-17 16:20:00 +02:00
emboss */*: sync with upstream 2016-07-22 05:22:19 +02:00
fasta */*: sync with upstream 2016-10-22 19:45:15 +02:00
fasta3 */*: sync with upstream 2016-05-19 16:29:05 +02:00
fastdnaml */*: sync with upstream 2016-01-12 23:08:37 +01:00
fastool */*: sync with upstream 2017-01-04 07:25:40 +01:00
fasttree */*: sync with upstream 2017-09-10 16:31:24 +02:00
fastx-toolkit */*: sync with upstream 2016-04-02 16:03:17 +02:00
fluctuate */*: sync with upstream 2015-11-19 07:42:10 +01:00
garlic ports: pull in a snapshot of the FreeBSD ports tree 2014-11-09 14:03:21 +01:00
gff2ps */*: sync with upstream 2016-04-02 16:03:17 +02:00
gmap */*: sync with upstream 2017-05-14 12:46:30 +02:00
gperiodic */*: sync with upstream 2016-12-09 07:25:04 +01:00
grappa */*: sync with upstream 2016-05-19 16:29:05 +02:00
hmmer */*: sync with upstream 2017-10-13 18:11:37 +02:00
htslib */*: sync with upstream 2017-10-25 21:27:38 +02:00
iolib */*: sync with upstream 2017-05-14 12:46:30 +02:00
iqtree */*: sync with upstream 2017-10-22 11:38:47 +02:00
jalview */*: sync with upstream 2016-05-19 16:29:05 +02:00
jellyfish */*: sync with upstream 2017-09-10 16:31:24 +02:00
lagan */*: sync with upstream 2016-05-19 16:29:05 +02:00
lamarc */*: sync with upstream 2016-12-18 10:25:29 +01:00
libgtextutils */*: sync with upstream 2016-10-22 19:45:15 +02:00
libsbml */*: sync with upstream 2017-05-17 16:46:21 +02:00
linux-foldingathome */*: sync with upstream 2016-09-16 14:21:20 +02:00
mafft */*: sync with upstream 2017-09-17 16:20:00 +02:00
mapm3 */*: sync with upstream 2016-05-19 16:29:05 +02:00
migrate */*: sync with upstream 2016-04-18 01:10:53 +02:00
molden */*: sync with upstream 2017-09-28 11:31:38 +02:00
mopac */*: sync with upstream 2017-09-17 16:20:00 +02:00
mrbayes */*: sync with upstream 2017-06-28 01:50:08 +02:00
mummer */*: sync with upstream 2015-08-06 08:09:30 +02:00
muscle */*: sync with upstream 2016-11-12 06:52:30 +01:00
ncbi-blast+ */*: sync with upstream 2017-09-17 16:20:00 +02:00
ncbi-toolkit */*: sync with upstream 2016-12-09 07:25:04 +01:00
njplot */*: sync with upstream 2016-11-29 06:49:26 +01:00
p5-AcePerl */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-Bio-ASN1-EntrezGene */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-Bio-Coordinate */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-Bio-Das */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-Bio-Das-Lite */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-Bio-FeatureIO */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-Bio-GFF3 */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-Bio-Glite */*: sync with upstream 2016-04-02 16:03:17 +02:00
p5-Bio-Graphics */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-Bio-MAGETAB */*: sync with upstream 2016-04-02 16:03:17 +02:00
p5-Bio-NEXUS */*: sync with upstream 2016-05-19 16:29:05 +02:00
p5-Bio-Phylo */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-Bio-SCF */*: sync with upstream 2016-04-02 16:03:17 +02:00
p5-BioPerl */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-BioPerl-Run */*: sync with upstream 2017-09-16 12:42:43 +02:00
p5-transdecoder */*: sync with upstream 2017-01-04 07:25:40 +01:00
paml */*: sync with upstream 2016-11-04 23:07:26 +01:00
phrap ports: pull in a snapshot of the FreeBSD ports tree 2014-11-09 14:03:21 +01:00
phred ports: pull in a snapshot of the FreeBSD ports tree 2014-11-09 14:03:21 +01:00
phylip */*: sync with upstream 2016-04-02 16:03:17 +02:00
phyml */*: sync with upstream 2017-09-04 07:31:24 +02:00
plink */*: sync with upstream 2017-10-13 18:11:37 +02:00
plinkseq */*: sync with upstream 2017-05-14 12:46:30 +02:00
primer3 */*: sync with upstream 2017-09-17 16:20:00 +02:00
protomol */*: sync with upstream 2017-05-22 14:28:23 +02:00
psi88 */*: sync with upstream 2017-09-17 16:20:00 +02:00
py-biom-format */*: sync with upstream 2017-04-30 09:36:59 +02:00
py-biopython */*: sync with upstream 2017-08-21 07:34:07 +02:00
py-bx-python */*: sync with upstream 2017-05-06 16:28:07 +02:00
py-pysam */*: sync with upstream 2017-06-10 20:33:53 +02:00
pycogent */*: sync with upstream 2016-08-09 06:45:30 +02:00
pyfasta */*: sync with upstream 2016-05-19 16:29:05 +02:00
python-nexus */*: sync with upstream 2017-07-23 20:15:36 +02:00
recombine */*: sync with upstream 2016-07-20 03:30:21 +02:00
ruby-bio */*: sync with upstream 2017-05-07 14:14:24 +02:00
rubygem-bio */*: sync with upstream 2017-02-07 08:19:59 +01:00
samtools */*: sync with upstream 2017-10-25 21:27:38 +02:00
seaview */*: sync with upstream 2017-07-22 13:06:59 +02:00
seqan */*: sync with upstream 2016-09-16 14:21:20 +02:00
seqan-apps */*: sync with upstream 2017-09-25 07:21:42 +02:00
seqan1 */*: sync with upstream 2016-07-20 03:30:21 +02:00
seqio ports: pull in a snapshot of the FreeBSD ports tree 2014-11-09 14:03:21 +01:00
seqtools */*: sync with upstream 2017-09-23 17:04:06 +02:00
sim4 ports: pull in a snapshot of the FreeBSD ports tree 2014-11-09 14:03:21 +01:00
slclust */*: sync with upstream 2017-01-21 18:28:10 +01:00
ssaha */*: sync with upstream 2017-10-13 18:11:37 +02:00
t_coffee */*: sync with upstream 2017-09-10 16:31:24 +02:00
tinker */*: sync with upstream 2017-09-17 16:20:00 +02:00
treepuzzle ports: pull in a snapshot of the FreeBSD ports tree 2014-11-09 14:03:21 +01:00
trimmomatic */*: sync with upstream 2016-03-18 07:41:25 +01:00
tRNAscan-SE */*: sync with upstream 2017-10-13 18:11:37 +02:00
ugene */*: sync with upstream 2017-09-23 17:04:06 +02:00
vcftools */*: sync with upstream 2017-01-04 07:25:40 +01:00
velvet */*: sync previously available, but unused ports 2015-04-22 06:45:04 +02:00
wise */*: sync with upstream 2016-12-09 07:25:04 +01:00
xmolwt */*: sync with upstream 2016-12-09 07:25:04 +01:00
Makefile */*: sync with upstream 2017-10-22 11:38:47 +02:00