49 lines
1.4 KiB
Text
49 lines
1.4 KiB
Text
--- makefile.orig 2012-01-04 08:50:43 UTC
|
|
+++ makefile
|
|
@@ -1,5 +1,5 @@
|
|
#uncomment and locally adapt next line to fix the full helpfile path name
|
|
-HELPFILENAME = -DHELPFILENAME=\"/usr/share/njplot/njplot.help\"
|
|
+HELPFILENAME = -DHELPFILENAME=\"${DATADIR}/njplot.help\"
|
|
|
|
#comment out next line and uncomment next 2 to use the PDFLib Lite library
|
|
NO_PDF = -DNO_PDF
|
|
@@ -7,27 +7,31 @@ NO_PDF = -DNO_PDF
|
|
#PDFLIB = -L$(PDF) -lpdf
|
|
|
|
# c compiler and linker
|
|
-CC = gcc
|
|
+CC ?= cc
|
|
|
|
-# Vibrant top directory
|
|
-VIBRANT = /usr/include/ncbi
|
|
+NCBIINC = $(LOCALBASE)/include/ncbi
|
|
+NCBILIB = $(LOCALBASE)/lib/ncbi
|
|
|
|
OBJECTS = njplot-vib.o
|
|
OBJUNROOTED = unrooted-vib.o preptree.o
|
|
|
|
+CFLAGS = -c -DWIN_MOTIF -Dunix -I${LOCALBASE}/include -I$(NCBIINC) $(HELPFILENAME) $(NO_PDF) -Wimplicit-function-declaration
|
|
|
|
-CFLAGS = -c -DWIN_MOTIF -Dunix -I$(VIBRANT) $(HELPFILENAME) $(NO_PDF)
|
|
-
|
|
all: njplot unrooted newicktops newicktotxt
|
|
|
|
|
|
njplot : $(OBJECTS)
|
|
$(CC) -o njplot $(OBJECTS) \
|
|
- -lvibrant -lncbi -lXm -lXt
|
|
-
|
|
+ -L$(NCBILIB) \
|
|
+ -lvibrant -lncbi \
|
|
+ $(MOTIFLIB) \
|
|
+ -L$(LOCALBASE)/lib -lXmu -lXt -lX11 -lm
|
|
+
|
|
unrooted : $(OBJUNROOTED)
|
|
$(CC) -o unrooted $(OBJUNROOTED) \
|
|
- -lvibrant -lncbi -lXm -lXt
|
|
+ -L$(NCBILIB) -lvibrant -lncbi \
|
|
+ $(MOTIFLIB) \
|
|
+ -L$(LOCALBASE)/lib -lXmu -lXt -lX11 -lm
|
|
|
|
newicktops: njplot-vib.c
|
|
$(CC) -DNO_GUI -DNO_PDF -o $@ njplot-vib.c -lm
|