opnsense-ports/biology
Franco Fichtner cb5a5cdaea */*: sync with upstream
Taken from: HardenedBSD
2018-12-05 04:28:20 +01:00
..
artemis */*: sync with upstream 2018-06-13 06:06:57 +02:00
avida */*: sync with upstream 2018-09-03 02:25:18 +02:00
babel */*: sync with upstream 2015-09-10 05:23:56 +02:00
bamtools */*: sync with upstream 2018-03-29 04:01:47 +02:00
bcftools */*: sync with upstream 2018-08-03 04:19:46 +02:00
bedtools */*: sync with upstream 2018-09-23 01:08:08 +02:00
biococoa */*: sync with upstream 2018-09-27 07:42:36 +02:00
bowtie */*: sync with upstream 2018-11-04 20:11:23 +01:00
bowtie2 */*: sync with upstream 2018-10-11 08:39:56 +02:00
bwa */*: sync with upstream 2018-01-31 07:43:13 +01:00
canu */*: sync with upstream 2018-11-04 20:11:23 +01:00
cd-hit */*: sync with upstream 2018-07-30 06:47:24 +02:00
cdbfasta */*: sync with upstream 2018-01-31 07:43:13 +01:00
chemeq */*: sync with upstream 2016-12-18 10:25:29 +01:00
clustal-omega */*: sync with upstream 2018-05-22 08:51:30 +02:00
clustalw */*: sync with upstream 2018-05-21 11:07:38 +02:00
clustalx */*: sync with upstream 2018-12-03 05:38:29 +01:00
consed */*: sync with upstream 2016-09-16 14:21:20 +02:00
cytoscape */*: sync with upstream 2018-08-13 02:34:52 +02:00
ddocent */*: sync with upstream 2018-04-19 19:43:55 +02:00
diamond */*: sync with upstream 2018-05-14 16:46:17 +02:00
emboss */*: sync with upstream 2016-07-22 05:22:19 +02:00
exonerate */*: sync with upstream 2018-07-13 22:49:27 +02:00
fasta */*: sync with upstream 2016-10-22 19:45:15 +02:00
fasta3 */*: sync with upstream 2016-05-19 16:29:05 +02:00
fastahack */*: sync with upstream 2018-04-16 19:20:41 +02:00
fastdnaml */*: sync with upstream 2016-01-12 23:08:37 +01:00
fastool */*: sync with upstream 2018-01-31 07:43:13 +01:00
fastqc */*: sync with upstream 2017-12-01 06:13:09 +01:00
fasttree */*: sync with upstream 2018-07-30 06:47:24 +02:00
fastx-toolkit */*: sync with upstream 2018-05-17 07:00:10 +02:00
fluctuate */*: sync with upstream 2015-11-19 07:42:10 +01:00
freebayes */*: sync with upstream 2018-09-18 21:34:02 +02:00
garlic */*: sync with upstream 2018-03-11 22:56:45 +01:00
gatk */*: sync with upstream 2018-12-05 04:28:20 +01:00
gff2ps */*: sync with upstream 2016-04-02 16:03:17 +02:00
gmap */*: sync with upstream 2018-01-31 07:43:13 +01:00
gperiodic */*: sync with upstream 2016-12-09 07:25:04 +01:00
grappa */*: sync with upstream 2016-05-19 16:29:05 +02:00
hmmer */*: sync with upstream 2018-07-11 17:04:07 +02:00
htslib */*: sync with upstream 2018-08-03 04:19:46 +02:00
hyphy */*: sync with upstream 2018-10-21 17:51:43 +02:00
igv */*: sync with upstream 2018-12-05 04:28:20 +01:00
infernal */*: sync with upstream 2018-09-28 03:59:49 +02:00
iolib */*: sync with upstream 2018-11-06 04:53:55 +01:00
iqtree */*: sync with upstream 2018-10-29 07:23:13 +01:00
jalview */*: sync with upstream 2016-05-19 16:29:05 +02:00
jellyfish */*: sync with upstream 2018-07-30 06:47:24 +02:00
kallisto */*: sync with upstream 2018-09-07 04:34:30 +02:00
lagan */*: sync with upstream 2016-05-19 16:29:05 +02:00
lamarc */*: sync with upstream 2018-09-03 02:25:18 +02:00
libgtextutils */*: sync with upstream 2018-03-30 06:45:57 +02:00
libsbml */*: sync with upstream 2018-09-03 02:25:18 +02:00
linux-foldingathome */*: sync with upstream 2018-07-27 05:35:59 +02:00
mafft */*: sync with upstream 2017-09-17 16:20:00 +02:00
mapm3 */*: sync with upstream 2016-05-19 16:29:05 +02:00
migrate */*: sync with upstream 2018-03-19 05:59:50 +01:00
molden */*: sync with upstream 2018-11-13 09:32:33 +01:00
mopac */*: sync with upstream 2018-07-30 06:47:24 +02:00
mrbayes */*: sync with upstream 2017-06-28 01:50:08 +02:00
mummer */*: sync with upstream 2017-10-30 00:37:07 +01:00
muscle */*: sync with upstream 2016-11-12 06:52:30 +01:00
ncbi-blast+ */*: sync with upstream 2018-07-30 06:47:24 +02:00
ncbi-cxx-toolkit */*: sync with upstream 2018-10-07 22:32:04 +02:00
ncbi-toolkit */*: sync with upstream 2018-11-06 04:53:55 +01:00
ngs-sdk */*: sync with upstream 2018-10-19 07:00:20 +02:00
njplot */*: sync with upstream 2016-11-29 06:49:26 +01:00
p5-AcePerl */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-ASN1-EntrezGene */*: sync with upstream 2018-10-10 05:05:40 +02:00
p5-Bio-Coordinate */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-Das */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-Das-Lite */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-FeatureIO */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-GFF3 */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-Glite */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-Graphics */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-MAGETAB */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-NEXUS */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-Phylo */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-Bio-SCF */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-BioPerl */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-BioPerl-Run */*: sync with upstream 2018-10-07 08:41:37 +02:00
p5-transdecoder */*: sync with upstream 2018-10-23 18:01:52 +02:00
p5-TrimGalore */*: sync with upstream 2017-12-10 06:17:19 +01:00
paml */*: sync with upstream 2018-04-26 19:47:02 +02:00
pbbam */*: sync with upstream 2018-09-18 21:34:02 +02:00
pbcopper */*: sync with upstream 2018-09-18 21:34:02 +02:00
pbseqan */*: sync with upstream 2018-04-23 07:02:47 +02:00
pear-merger */*: sync with upstream 2018-06-22 07:30:49 +02:00
phrap */*: sync with upstream 2018-09-11 00:35:04 +02:00
phred */*: sync with upstream 2018-09-11 00:35:04 +02:00
phylip */*: sync with upstream 2018-01-01 17:44:09 +01:00
phyml */*: sync with upstream 2018-09-23 01:08:08 +02:00
plinkseq */*: sync with upstream 2018-01-31 07:43:13 +01:00
primer3 */*: sync with upstream 2018-09-03 02:25:18 +02:00
protomol */*: sync with upstream 2018-09-03 02:25:18 +02:00
psi88 */*: sync with upstream 2018-07-30 06:47:24 +02:00
py-biom-format */*: sync with upstream 2018-10-07 08:41:37 +02:00
py-biopython */*: sync with upstream 2018-09-03 02:25:18 +02:00
py-bx-python */*: sync with upstream 2018-09-03 02:25:18 +02:00
py-cutadapt */*: sync with upstream 2018-09-21 07:08:19 +02:00
py-Genesis-PyAPI */*: sync with upstream 2018-06-21 08:02:46 +02:00
py-gffutils */*: sync with upstream 2018-10-19 07:00:20 +02:00
py-gtfparse */*: sync with upstream 2018-10-19 07:00:20 +02:00
py-loompy */*: sync with upstream 2018-10-30 17:41:14 +01:00
py-macs2 */*: sync with upstream 2018-03-11 05:13:37 +01:00
py-orange3-bioinformatics */*: sync with upstream 2018-10-13 09:58:04 +02:00
py-orange3-single-cell */*: sync with upstream 2018-10-18 20:08:19 +02:00
py-pyfaidx */*: sync with upstream 2018-10-28 00:45:21 +02:00
py-pysam */*: sync with upstream 2018-09-17 21:04:44 +02:00
pycogent */*: sync with upstream 2018-06-21 08:02:46 +02:00
pyfasta */*: sync with upstream 2018-03-11 05:13:37 +01:00
python-nexus */*: sync with upstream 2018-09-23 01:08:08 +02:00
rainbow */*: sync with upstream 2018-04-03 03:01:34 +02:00
recombine */*: sync with upstream 2016-07-20 03:30:21 +02:00
ruby-bio */*: sync with upstream 2017-05-07 14:14:24 +02:00
rubygem-bio */*: sync with upstream 2018-09-22 08:11:31 +02:00
samtools */*: sync with upstream 2018-08-03 04:19:46 +02:00
seaview */*: sync with upstream 2018-09-09 06:14:56 +02:00
seqan */*: sync with upstream 2018-03-10 06:34:33 +01:00
seqan-apps */*: sync with upstream 2018-11-10 09:25:01 +01:00
seqan1 */*: sync with upstream 2016-07-20 03:30:21 +02:00
seqio */*: sync with upstream 2017-11-27 06:44:53 +01:00
seqtk */*: sync with upstream 2018-04-04 01:50:27 +02:00
seqtools */*: sync with upstream 2017-12-12 03:36:14 +01:00
sim4 ports: pull in a snapshot of the FreeBSD ports tree 2014-11-09 14:03:21 +01:00
slclust */*: sync with upstream 2018-01-31 07:43:13 +01:00
smithwaterman */*: sync with upstream 2018-04-15 23:00:06 +02:00
stacks */*: sync with upstream 2018-10-28 00:45:21 +02:00
stringtie */*: sync with upstream 2018-07-13 22:49:27 +02:00
t_coffee */*: sync with upstream 2018-07-30 06:47:24 +02:00
tabixpp */*: sync with upstream 2018-04-15 06:37:45 +02:00
treepuzzle ports: pull in a snapshot of the FreeBSD ports tree 2014-11-09 14:03:21 +01:00
trimadap */*: sync with upstream 2018-06-22 07:30:49 +02:00
trimmomatic */*: sync with upstream 2018-01-31 07:43:13 +01:00
tRNAscan-SE */*: sync with upstream 2018-09-28 03:59:49 +02:00
ugene */*: sync with upstream 2018-09-03 02:25:18 +02:00
unanimity */*: sync with upstream 2018-09-18 21:34:02 +02:00
vcflib */*: sync with upstream 2018-06-22 07:30:49 +02:00
vcftools */*: sync with upstream 2018-08-04 02:16:37 +02:00
velvet */*: sync with upstream 2018-01-12 06:50:29 +01:00
wise */*: sync with upstream 2016-12-09 07:25:04 +01:00
xmolwt */*: sync with upstream 2018-10-12 08:34:08 +02:00
Makefile */*: sync with upstream 2018-12-05 04:28:20 +01:00