opnsense-ports/biology
Franco Fichtner 9b365a1f8a */*: sync with upstream
Taken from: FreeBSD
2021-08-02 11:24:11 +02:00
..
abyss */*: sync with upstream 2021-04-23 08:57:01 +02:00
ad2vcf */*: sync with upstream 2021-06-14 08:46:41 +02:00
artemis */*: sync with upstream 2021-04-07 20:24:01 +02:00
avida */*: sync with upstream 2021-04-07 20:24:01 +02:00
babel */*: sync with upstream 2021-04-07 20:24:01 +02:00
bamtools */*: sync with upstream 2021-07-09 15:07:54 +02:00
bbmap */*: sync with upstream 2021-04-20 09:42:30 +02:00
bcftools */*: sync with upstream 2021-07-21 08:08:56 +02:00
bedtools */*: sync with upstream 2021-04-08 08:40:15 +02:00
bioawk */*: sync with upstream 2021-04-08 08:40:15 +02:00
biococoa */*: sync with upstream 2021-04-08 08:40:15 +02:00
biolibc */*: sync with upstream 2021-06-14 08:46:41 +02:00
bioparser */*: sync with upstream 2021-04-08 08:40:15 +02:00
biosoup */*: sync with upstream 2021-04-08 08:40:15 +02:00
biostar-tools */*: sync with upstream 2021-07-21 08:08:56 +02:00
bolt-lmm */*: sync with upstream 2021-08-02 11:24:11 +02:00
bowtie */*: sync with upstream 2021-04-08 08:40:15 +02:00
bowtie2 */*: sync with upstream 2021-05-26 16:13:39 +02:00
bwa */*: sync with upstream 2021-04-08 08:40:15 +02:00
canu */*: sync with upstream 2021-04-08 08:40:15 +02:00
cd-hit */*: sync with upstream 2021-06-10 21:04:46 +02:00
cdbfasta */*: sync with upstream 2021-04-07 20:24:01 +02:00
checkm */*: sync with upstream 2021-05-19 09:44:31 +02:00
clustal-omega */*: sync with upstream 2021-04-08 08:40:15 +02:00
clustalw */*: sync with upstream 2021-04-07 20:24:01 +02:00
cufflinks */*: sync with upstream 2021-04-08 08:40:15 +02:00
cytoscape */*: sync with upstream 2021-05-19 09:44:31 +02:00
ddocent */*: sync with upstream 2021-04-08 08:40:15 +02:00
diamond */*: sync with upstream 2021-08-02 11:24:11 +02:00
dsr-pdb */*: sync with upstream 2021-04-08 08:40:15 +02:00
edlib */*: sync with upstream 2021-04-08 08:40:15 +02:00
emboss */*: sync with upstream 2021-04-07 20:24:01 +02:00
erminej */*: sync with upstream 2021-07-21 08:08:56 +02:00
exonerate */*: sync with upstream 2021-04-07 20:24:01 +02:00
fasta */*: sync with upstream 2021-05-19 09:44:31 +02:00
fasta3 */*: sync with upstream 2021-05-19 09:44:31 +02:00
fastahack */*: sync with upstream 2021-04-08 08:40:15 +02:00
fastdnaml */*: sync with upstream 2021-04-07 20:24:01 +02:00
fastool */*: sync with upstream 2021-04-08 08:40:15 +02:00
fastp */*: sync with upstream 2021-04-08 08:40:15 +02:00
fastqc */*: sync with upstream 2021-04-08 08:40:15 +02:00
fasttree */*: sync with upstream 2021-06-15 19:33:36 +02:00
fastx-toolkit */*: sync with upstream 2021-08-02 11:24:11 +02:00
figtree */*: sync with upstream 2021-04-08 08:40:15 +02:00
fluctuate */*: sync with upstream 2021-04-07 20:24:01 +02:00
freebayes */*: sync with upstream 2021-04-08 08:40:15 +02:00
garlic */*: sync with upstream 2021-04-07 20:24:01 +02:00
gatk */*: sync with upstream 2021-04-08 08:40:15 +02:00
gcta */*: sync with upstream 2021-04-08 08:40:15 +02:00
gemma */*: sync with upstream 2021-06-17 08:22:39 +02:00
generand */*: sync with upstream 2021-04-08 08:40:15 +02:00
gff2ps */*: sync with upstream 2021-04-07 20:24:01 +02:00
gmap */*: sync with upstream 2021-04-07 20:24:01 +02:00
gperiodic */*: sync with upstream 2021-04-07 20:24:01 +02:00
graphlan */*: sync with upstream 2021-04-08 08:40:15 +02:00
groopm */*: sync with upstream 2021-05-19 09:44:31 +02:00
haplohseq */*: sync with upstream 2021-04-08 08:40:15 +02:00
hhsuite */*: sync with upstream 2021-07-09 15:07:54 +02:00
hisat2 */*: sync with upstream 2021-04-08 08:40:15 +02:00
hmmer */*: sync with upstream 2021-04-07 20:24:01 +02:00
htslib */*: sync with upstream 2021-07-21 08:08:56 +02:00
hyphy */*: sync with upstream 2021-06-07 13:46:03 +02:00
igv */*: sync with upstream 2021-06-29 13:29:17 +02:00
infernal */*: sync with upstream 2021-04-08 08:40:15 +02:00
iolib */*: sync with upstream 2021-05-21 11:32:43 +02:00
iqtree */*: sync with upstream 2021-04-08 08:40:15 +02:00
jalview */*: sync with upstream 2021-06-29 13:29:17 +02:00
jellyfish */*: sync with upstream 2021-08-02 11:24:11 +02:00
kallisto */*: sync with upstream 2021-04-08 08:40:15 +02:00
lamarc */*: sync with upstream 2021-04-07 20:24:01 +02:00
libbigwig */*: sync with upstream 2021-04-08 08:40:15 +02:00
libgtextutils */*: sync with upstream 2021-04-08 08:40:15 +02:00
libsbml */*: sync with upstream 2021-05-19 09:44:31 +02:00
linux-foldingathome */*: sync with upstream 2021-06-29 13:29:17 +02:00
mafft */*: sync with upstream 2021-08-02 11:24:11 +02:00
mapm3 */*: sync with upstream 2021-04-07 20:24:01 +02:00
migrate */*: sync with upstream 2021-04-07 20:24:01 +02:00
minimap2 */*: sync with upstream 2021-05-31 08:00:31 +02:00
mmseqs2 */*: sync with upstream 2021-06-30 10:59:04 +02:00
molden */*: sync with upstream 2021-06-23 09:00:51 +02:00
mopac */*: sync with upstream 2021-04-07 20:24:01 +02:00
mothur */*: sync with upstream 2021-05-19 09:44:31 +02:00
mrbayes */*: sync with upstream 2021-05-19 09:44:31 +02:00
mummer */*: sync with upstream 2021-04-07 20:24:01 +02:00
muscle */*: sync with upstream 2021-04-07 20:24:01 +02:00
ncbi-blast+ */*: sync with upstream 2021-08-02 11:24:11 +02:00
ncbi-cxx-toolkit */*: sync with upstream 2021-04-08 08:40:15 +02:00
ncbi-entrez-direct */*: sync with upstream 2021-05-02 17:05:20 +02:00
ncbi-toolkit */*: sync with upstream 2021-04-07 20:24:01 +02:00
ncbi-vdb */*: sync with upstream 2021-05-02 17:05:20 +02:00
ngs-sdk */*: sync with upstream 2021-04-16 09:03:49 +02:00
p5-AcePerl */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-ASN1-EntrezGene */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-Cluster */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-Coordinate */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-Das */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-Das-Lite */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-DB-EMBL */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-DB-NCBIHelper */*: sync with upstream 2021-07-09 15:07:54 +02:00
p5-Bio-FeatureIO */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-GFF3 */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-Glite */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-Graphics */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-MAGETAB */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-NEXUS */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-Phylo */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-SCF */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-Bio-Variation */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-BioPerl */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-BioPerl-Run */*: sync with upstream 2021-04-07 20:24:01 +02:00
p5-transdecoder */*: sync with upstream 2021-04-08 08:40:15 +02:00
p5-TrimGalore */*: sync with upstream 2021-04-08 08:40:15 +02:00
paml */*: sync with upstream 2021-04-07 20:24:01 +02:00
pbbam */*: sync with upstream 2021-04-08 08:40:15 +02:00
pbseqan */*: sync with upstream 2021-04-08 08:40:15 +02:00
peak-classifier */*: sync with upstream 2021-06-15 19:33:36 +02:00
pear-merger */*: sync with upstream 2021-04-08 08:40:15 +02:00
phrap */*: sync with upstream 2021-05-19 09:44:31 +02:00
phred */*: sync with upstream 2021-05-19 09:44:31 +02:00
phyml */*: sync with upstream 2021-04-16 09:03:49 +02:00
picard-tools */*: sync with upstream 2021-04-08 08:40:15 +02:00
plink */*: sync with upstream 2021-04-08 08:40:15 +02:00
pooler */*: sync with upstream 2021-08-02 11:24:11 +02:00
primer3 */*: sync with upstream 2021-08-02 11:24:11 +02:00
prodigal */*: sync with upstream 2021-04-08 08:40:15 +02:00
prodigy-lig */*: sync with upstream 2021-04-08 08:40:15 +02:00
protomol */*: sync with upstream 2021-04-07 20:24:01 +02:00
psi88 */*: sync with upstream 2021-04-07 20:24:01 +02:00
py-bigwig */*: sync with upstream 2021-04-22 10:34:08 +02:00
py-biom-format */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-biopython */*: sync with upstream 2021-04-07 20:24:01 +02:00
py-bx-python */*: sync with upstream 2021-04-07 20:24:01 +02:00
py-crossmap */*: sync with upstream 2021-04-22 10:34:08 +02:00
py-cutadapt */*: sync with upstream 2021-05-19 09:44:31 +02:00
py-dnaio */*: sync with upstream 2021-05-19 09:44:31 +02:00
py-ete3 */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-Genesis-PyAPI */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-gffutils */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-goatools */*: sync with upstream 2021-07-05 10:55:42 +02:00
py-gtfparse */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-hits */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-loompy */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-macs2 */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-multiqc */*: sync with upstream 2021-05-19 09:44:31 +02:00
py-orange3-bioinformatics */*: sync with upstream 2021-05-02 17:05:20 +02:00
py-orange3-single-cell */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-pandas-charm */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-pyfaidx */*: sync with upstream 2021-05-02 17:05:20 +02:00
py-pysam */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-resdk */*: sync with upstream 2021-05-24 19:48:26 +02:00
py-scikit-bio */*: sync with upstream 2021-04-08 08:40:15 +02:00
py-xenaPython */*: sync with upstream 2021-04-08 08:40:15 +02:00
pyfasta */*: sync with upstream 2021-04-07 20:24:01 +02:00
python-nexus */*: sync with upstream 2021-04-07 20:24:01 +02:00
rainbow */*: sync with upstream 2021-04-08 08:40:15 +02:00
rampler */*: sync with upstream 2021-04-08 08:40:15 +02:00
readseq */*: sync with upstream 2021-04-20 09:42:30 +02:00
recombine */*: sync with upstream 2021-04-07 20:24:01 +02:00
ruby-bio */*: sync with upstream 2021-04-07 20:24:01 +02:00
rubygem-bio */*: sync with upstream 2021-07-05 10:55:42 +02:00
rubygem-bio-executables */*: sync with upstream 2021-04-07 20:24:01 +02:00
rubygem-bio-old-biofetch-emulator */*: sync with upstream 2021-04-07 20:24:01 +02:00
rubygem-bio-shell */*: sync with upstream 2021-04-07 20:24:01 +02:00
samtools */*: sync with upstream 2021-07-21 08:08:56 +02:00
scrm */*: sync with upstream 2021-04-08 08:40:15 +02:00
seaview */*: sync with upstream 2021-04-07 20:24:01 +02:00
seqan */*: sync with upstream 2021-04-07 20:24:01 +02:00
seqan-apps */*: sync with upstream 2021-08-02 11:24:11 +02:00
seqan1 */*: sync with upstream 2021-04-07 20:24:01 +02:00
seqan3 */*: sync with upstream 2021-05-31 08:00:31 +02:00
seqio */*: sync with upstream 2021-04-07 20:24:01 +02:00
seqkit */*: sync with upstream 2021-05-21 11:32:43 +02:00
seqtk */*: sync with upstream 2021-04-08 08:40:15 +02:00
sim4 */*: sync with upstream 2021-04-07 20:24:01 +02:00
slclust */*: sync with upstream 2021-04-08 08:40:15 +02:00
smithwaterman */*: sync with upstream 2021-04-08 08:40:15 +02:00
snpeff */*: sync with upstream 2021-04-20 09:42:30 +02:00
spoa */*: sync with upstream 2021-04-08 08:40:15 +02:00
sra-tools */*: sync with upstream 2021-06-23 09:00:51 +02:00
stacks */*: sync with upstream 2021-04-08 08:40:15 +02:00
star */*: sync with upstream 2021-04-08 08:40:15 +02:00
stringtie */*: sync with upstream 2021-04-08 08:40:15 +02:00
subread */*: sync with upstream 2021-08-02 11:24:11 +02:00
tabixpp */*: sync with upstream 2021-04-08 08:40:15 +02:00
taxonkit */*: sync with upstream 2021-05-27 09:32:38 +02:00
treekin */*: sync with upstream 2021-06-14 08:46:41 +02:00
treepuzzle */*: sync with upstream 2021-04-07 20:24:01 +02:00
trimadap */*: sync with upstream 2021-04-08 08:40:15 +02:00
trimmomatic */*: sync with upstream 2021-04-07 20:24:01 +02:00
tRNAscan-SE */*: sync with upstream 2021-04-07 20:24:01 +02:00
ucsc-userapps */*: sync with upstream 2021-05-19 09:44:31 +02:00
ugene */*: sync with upstream 2021-06-29 13:29:17 +02:00
unikmer */*: sync with upstream 2021-08-02 11:24:11 +02:00
vcf-split */*: sync with upstream 2021-06-14 08:46:41 +02:00
vcf2hap */*: sync with upstream 2021-06-14 08:46:41 +02:00
vcflib */*: sync with upstream 2021-04-08 08:40:15 +02:00
vcftools */*: sync with upstream 2021-04-08 08:40:15 +02:00
velvet */*: sync with upstream 2021-04-07 20:24:01 +02:00
viennarna */*: sync with upstream 2021-06-17 08:22:39 +02:00
vsearch */*: sync with upstream 2021-06-21 05:26:03 +02:00
vt */*: sync with upstream 2021-04-08 08:40:15 +02:00
wise */*: sync with upstream 2021-04-07 20:24:01 +02:00
Makefile */*: sync with upstream 2021-07-21 08:08:56 +02:00