forked from Lainports/opnsense-ports
54 lines
1.1 KiB
Makefile
54 lines
1.1 KiB
Makefile
# Created by: Reed A. Cartwright <cartwright@asu.edu>
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# $FreeBSD$
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PORTNAME= bcftools
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PORTVERSION= 1.3.1
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CATEGORIES= biology
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MAINTAINER= cartwright@asu.edu
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COMMENT= Tools for manipulating next-generation sequencing data
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LICENSE= MIT
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# LICENSE_FILE= ${WRKSRC}/LICENSE
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BUILD_DEPENDS= htslib>=1.3:biology/htslib
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LIB_DEPENDS= libhts.so:biology/htslib
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TEST_DEPENDS= bash:shells/bash
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CONFLICTS_BUILD=openssl
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USE_GITHUB= yes
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GH_ACCOUNT= samtools
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USES= gmake perl5 shebangfix
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USE_PERL5= test
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SUB_FILES= pkg-message
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SHEBANG_FILES= vcfutils.pl plot-vcfstats plugins/color-chrs.pl test/test.pl
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OPTIONS_DEFINE= GPL
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GPL_DESC= Enable modules that rely on GPL code
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OPTIONS_DEFAULT= GPL
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GPL_LIB_DEPENDS= libgsl.so:math/gsl
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.include <bsd.port.options.mk>
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CPPFLAGS+= -I${LOCALBASE}/include
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LDFLAGS+= -L${LOCALBASE}/lib
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MAKE_ENV= INSTALL_LIB="${INSTALL_LIB}" \
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INSTALL_DATA="${INSTALL_DATA}" \
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INSTALL_PROGRAM="${INSTALL_PROGRAM}" \
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INSTALL_SCRIPT="${INSTALL_SCRIPT}" \
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INSTALL_DIR="${MKDIR}"
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.if ${PORT_OPTIONS:MGPL}
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MAKE_ENV+= USE_GPL=1
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LICENSE= GPLv3
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.endif
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PLIST_SUB= PORTVERSION="${PORTVERSION}"
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TEST_TARGET= test
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.include <bsd.port.mk>
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